Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20granulosus_20[genbank_20GCA_5F000524195.1_202014-01- 28] 957 sequences; 110,837,706 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq300 82.4 1e-13 >seq300 Length=1428 Score = 82.4 bits (90), Expect = 1e-13 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 185 TTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATT 244 || ||| ||||| ||||||| |||||||||| |||| || ||| |||||||||| Sbjct 842 TTACCGTCTACATACCCTTTAAACCCAATAAAGATAACTAACACTAGCCTCCTACGTATT 901 Query 245 ACCGCGGCTGCTGGCACGTAGTT 267 |||||| |||||||||||||||| Sbjct 902 ACCGCGACTGCTGGCACGTAGTT 924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828792316247