Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20granulosus_20[genbank_20GCA_5F000524195.1_202014-01- 28] 957 sequences; 110,837,706 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq300 87.8 4e-15 >seq300 Length=1428 Score = 87.8 bits (96), Expect = 4e-15 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 189 GAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCG 248 ||||| || | |||| | | |||| | |||| ||||||| || |||||||||| Sbjct 791 GAATTTCTGGAGTAGAGATAAAATTTTTTGATACCAGGAGGACTGTCAACGGCGAAGGCG 732 Query 249 GCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGAT 308 | | || |||||||| |||| |||| || |||| ||||||||||||||||| Sbjct 731 TCCTTCTATGTAATAACTGACGTTGAGAGACGAAGGCTTGGGTAGCAAACAGGATTAGAT 672 Query 309 ACCCTGGTAGTCCACGCCGTAAACGATGAAT 339 ||||| |||||||| || | || ||||||| Sbjct 671 ACCCTAGTAGTCCAAGCAGACAATGATGAAT 641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203188485376