Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20granulosus_20[genbank_20GCA_5F000524195.1_202014-01- 28] 957 sequences; 110,837,706 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq819 172 1e-40 seq748 147 4e-33 >seq819 Length=201516 Score = 172 bits (190), Expect = 1e-40 Identities = 200/261 (77%), Gaps = 9/261 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||||||| | ||| |||||| || | | ||| |||||||||||||| || Sbjct 88800 CTTCTTAGAGGGACAAGCGGGAGAAGCCGCGCGA-GATAGAG-CAATAACAGGTCTGCGA 88857 Query 132 TGCCCTTAGATGTTCTGG-GCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||||||||| ||| |||| ||||||||||||||||| |||| | | |||| ||| | Sbjct 88858 TGCCCTTAGGTGT-CTGGAGCCGCACGCGCGCTACAATGACGGTGTCAACAAGTGAG--A 88914 Query 191 CCTT--GGCCGGA-AGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCA 247 |||| | || || ||| |||| || || || || | | |||||| ||||| | | Sbjct 88915 CCTTCTGTCCCGAGAGGGTTGGGCAAACTGGTCAATCACCGTCGTGACAGGGATCGGGGC 88974 Query 248 TTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTG 307 ||| |||| || | | | |||||||||| ||||||||| || ||||| ||| ||| || Sbjct 88975 TTGGAATTGTTCCCCGTGAACGAGGAATTCCTAGTAAGTGCAGGTCATAAGCTTGCGCTG 89034 Query 308 ATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||||| Sbjct 89035 ATTACGTCCCTGCCCTTTGTA 89055 >seq748 Length=96453 Score = 147 bits (162), Expect = 4e-33 Identities = 165/219 (75%), Gaps = 14/219 (6%) Strand=Plus/Plus Query 113 GGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACA 172 ||||||||| |||||||||||||||||||||| | ||||||||||||||||||| |||| Sbjct 68421 GGCAATAACGGGTCTGTGATGCCCTTAGATGTCCAGGGCCGCACGCGCGCTACAATGACG 68480 Query 173 GAGCCAACGAGTTCATCACCT--TGGCCGGA-AGGTCTGGGTAATCTTGTTAAACTCTGT 229 | | |||||||| |||| ||||| || ||| |||| || || || || | | Sbjct 68481 GTGTCAACGAGT--GAGACCTTCTGGCCCGAGAGGGTTGGGCAAACTGGTCAATCAC--- 68535 Query 230 CGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCG 289 ||||| | | ||| |||| | | | | |||||| || |||||||||||| Sbjct 68536 ------AGGGATCGGGGCTTGGAATTGTGCCCCGTGGACGAGGGATTCCTAGTAAGCGCA 68589 Query 290 TGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||| ||| ||| ||||||||||||||||||||||| Sbjct 68590 AGTCATAAGCTTGCGCTGATTACGTCCCTGCCCTTTGTA 68628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947190935296