Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Echinococcus_20granulosus_20[genbank_20GCA_5F000524195.1_202014-01-
28] 957 sequences; 110,837,706 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq819 172 1e-40
seq748 147 4e-33
>seq819
Length=201516
Score = 172 bits (190), Expect = 1e-40
Identities = 200/261 (77%), Gaps = 9/261 (3%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131
|||||||||||||| | ||| |||||| || | | ||| |||||||||||||| ||
Sbjct 88800 CTTCTTAGAGGGACAAGCGGGAGAAGCCGCGCGA-GATAGAG-CAATAACAGGTCTGCGA 88857
Query 132 TGCCCTTAGATGTTCTGG-GCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
||||||||| ||| |||| ||||||||||||||||| |||| | | |||| ||| |
Sbjct 88858 TGCCCTTAGGTGT-CTGGAGCCGCACGCGCGCTACAATGACGGTGTCAACAAGTGAG--A 88914
Query 191 CCTT--GGCCGGA-AGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCA 247
|||| | || || ||| |||| || || || || | | |||||| ||||| | |
Sbjct 88915 CCTTCTGTCCCGAGAGGGTTGGGCAAACTGGTCAATCACCGTCGTGACAGGGATCGGGGC 88974
Query 248 TTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTG 307
||| |||| || | | | |||||||||| ||||||||| || ||||| ||| ||| ||
Sbjct 88975 TTGGAATTGTTCCCCGTGAACGAGGAATTCCTAGTAAGTGCAGGTCATAAGCTTGCGCTG 89034
Query 308 ATTACGTCCCTGCCCTTTGTA 328
|||||||||||||||||||||
Sbjct 89035 ATTACGTCCCTGCCCTTTGTA 89055
>seq748
Length=96453
Score = 147 bits (162), Expect = 4e-33
Identities = 165/219 (75%), Gaps = 14/219 (6%)
Strand=Plus/Plus
Query 113 GGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACA 172
||||||||| |||||||||||||||||||||| | ||||||||||||||||||| ||||
Sbjct 68421 GGCAATAACGGGTCTGTGATGCCCTTAGATGTCCAGGGCCGCACGCGCGCTACAATGACG 68480
Query 173 GAGCCAACGAGTTCATCACCT--TGGCCGGA-AGGTCTGGGTAATCTTGTTAAACTCTGT 229
| | |||||||| |||| ||||| || ||| |||| || || || || | |
Sbjct 68481 GTGTCAACGAGT--GAGACCTTCTGGCCCGAGAGGGTTGGGCAAACTGGTCAATCAC--- 68535
Query 230 CGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCG 289
||||| | | ||| |||| | | | | |||||| || ||||||||||||
Sbjct 68536 ------AGGGATCGGGGCTTGGAATTGTGCCCCGTGGACGAGGGATTCCTAGTAAGCGCA 68589
Query 290 TGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
||||| ||| ||| |||||||||||||||||||||||
Sbjct 68590 AGTCATAAGCTTGCGCTGATTACGTCCCTGCCCTTTGTA 68628
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947190935296
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |