Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Echinococcus_20granulosus_20[genbank_20GCA_5F000524195.1_202014-01-
28] 957 sequences; 110,837,706 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq925 129 2e-27
>seq925
Length=809793
Score = 129 bits (142), Expect = 2e-27
Identities = 91/103 (88%), Gaps = 1/103 (1%)
Strand=Plus/Minus
Query 241 CACTTATT-CTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAG 299
|||||||| ||||||| ||| || ||||||||||||||||||||||||||| |||||
Sbjct 59162 CACTTATTGCTACACCCACCAAATCTCTTCACAAAGTCGGACTAGAGTCAAGCTGAACAG 59103
Query 300 GGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGC 342
|||||||||||||| ||||||| |||||||| | |||||||||
Sbjct 59102 GGTCTTCTTTCCCCACTGATTCTGCCAAGCCTGCTCCCTTGGC 59060
Score = 86.0 bits (94), Expect = 2e-14
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 22 AGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGC 81
|| ||||||| || |||| | ||| |||||||||||||| | ||| |||||||| |
Sbjct 59548 AGGTTTCTGTCCTGGCTGAGCTCATCTTGGGACACCTGCGTTACGATTTGACAGATGTAC 59489
Query 82 CGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
|||||||| ||||| |||| ||||| ||||||
Sbjct 59488 CGCCCCAGTCAAACACCCCGCCTGATAATGTC 59457
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635184351136
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |