Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015-
12-10] 1,217 sequences; 114,963,228 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq1213 165 3e-38
seq1214 161 4e-37
seq1210 161 4e-37
seq402 161 4e-37
seq381 161 4e-37
seq280 161 4e-37
seq208 161 4e-37
seq1211 147 9e-33
seq1215 140 1e-30
seq858 120 1e-24
seq597 120 1e-24
seq532 120 1e-24
seq245 120 1e-24
seq612 95.1 5e-17
>seq1213
Length=7437389
Score = 165 bits (182), Expect = 3e-38
Identities = 114/129 (88%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
|||||| ||||| |||||||||||||||||||||||| || |||| |||||||||||
Sbjct 5205353 GAGCATGCATGTTGAGACCCGAAAGATGGTGAACTATGCTTGCGTAGGTTGAAGCCAGAG 5205294
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
|||||||||||||||| || |||| |||||||||||||||||||||||||| |||||
Sbjct 5205293 GAAACTCTGGTGGAGGACCGTAGCGATTCTGGCGTGCAAATCGATCGTCAAACCGGGGTA 5205234
Query 675 TAGGGGCGA 683
|||||||||
Sbjct 5205233 TAGGGGCGA 5205225
Score = 165 bits (182), Expect = 3e-38
Identities = 114/129 (88%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
|||||| ||||| |||||||||||||||||||||||| || |||| |||||||||||
Sbjct 5291453 GAGCATGCATGTTGAGACCCGAAAGATGGTGAACTATGCTTGCGTAGGTTGAAGCCAGAG 5291512
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
|||||||||||||||| || |||| |||||||||||||||||||||||||| |||||
Sbjct 5291513 GAAACTCTGGTGGAGGACCGTAGCGATTCTGGCGTGCAAATCGATCGTCAAACCGGGGTA 5291572
Query 675 TAGGGGCGA 683
|||||||||
Sbjct 5291573 TAGGGGCGA 5291581
>seq1214
Length=6203119
Score = 161 bits (178), Expect = 4e-37
Identities = 113/129 (88%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
|||||| ||||| |||||||||||||||||||||||| || |||| |||||||||||
Sbjct 6037031 GAGCATGCATGTTGAGACCCGAAAGATGGTGAACTATGCTTGCGTAGGTTGAAGCCAGAG 6037090
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
|||||||||||||||| || |||| ||||| |||||||||||||||||||| || |||
Sbjct 6037091 GAAACTCTGGTGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGTCAAACGTGAGTA 6037150
Query 675 TAGGGGCGA 683
|||||||||
Sbjct 6037151 TAGGGGCGA 6037159
Score = 161 bits (178), Expect = 4e-37
Identities = 113/129 (88%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
|||||| ||||| |||||||||||||||||||||||| || |||| |||||||||||
Sbjct 6145948 GAGCATGCATGTTGAGACCCGAAAGATGGTGAACTATGCTTGCGTAGGTTGAAGCCAGAG 6146007
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
|||||||||||||||| || |||| ||||| |||||||||||||||||||| || |||
Sbjct 6146008 GAAACTCTGGTGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGTCAAACGTGAGTA 6146067
Query 675 TAGGGGCGA 683
|||||||||
Sbjct 6146068 TAGGGGCGA 6146076
>seq1210
Length=13762452
Score = 161 bits (178), Expect = 4e-37
Identities = 113/129 (88%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
|||||| ||||| |||||||||||||||||||||||| || |||| |||||||||||
Sbjct 8091982 GAGCATGCATGTTGAGACCCGAAAGATGGTGAACTATGCTTGCGTAGGTTGAAGCCAGAG 8091923
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
|||||||||||||||| || |||| ||||| |||||||||||||||||||| || |||
Sbjct 8091922 GAAACTCTGGTGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGTCAAACGTGAGTA 8091863
Query 675 TAGGGGCGA 683
|||||||||
Sbjct 8091862 TAGGGGCGA 8091854
Score = 161 bits (178), Expect = 4e-37
Identities = 113/129 (88%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
|||||| ||||| |||||||||||||||||||||||| || |||| |||||||||||
Sbjct 9900988 GAGCATGCATGTTGAGACCCGAAAGATGGTGAACTATGCTTGCGTAGGTTGAAGCCAGAG 9901047
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
|||||||||||||||| || |||| ||||| |||||||||||||||||||| || |||
Sbjct 9901048 GAAACTCTGGTGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGTCAAACGTGAGTA 9901107
Query 675 TAGGGGCGA 683
|||||||||
Sbjct 9901108 TAGGGGCGA 9901116
Score = 75.2 bits (82), Expect = 5e-11
Identities = 71/88 (81%), Gaps = 6/88 (7%)
Strand=Plus/Minus
Query 406 GGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGT---C 462
||||||||||| ||||||||||||||||| |||||| | ||||||| |||||| |
Sbjct 8092276 GGCCCGTCTTGAAACACGGACCAAGGAGTTTAACATGTGTGCGAGTCAAAGGGTGTGCGC 8092217
Query 463 AAA--CCCGTGCGCGTAATGAAAGTGAA 488
|| |||| | ||||| ||||||||||
Sbjct 8092216 GAAGCCCCGAG-GCGTAGTGAAAGTGAA 8092190
>seq402
Length=1867
Score = 161 bits (178), Expect = 4e-37
Identities = 113/129 (88%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
|||||| ||||| |||||||||||||||||||||||| || |||| |||||||||||
Sbjct 1537 GAGCATGCATGTTGAGACCCGAAAGATGGTGAACTATGCTTGCGTAGGTTGAAGCCAGAG 1596
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
|||||||||||||||| || |||| ||||| |||||||||||||||||||| || |||
Sbjct 1597 GAAACTCTGGTGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGTCAAACGTGAGTA 1656
Query 675 TAGGGGCGA 683
|||||||||
Sbjct 1657 TAGGGGCGA 1665
>seq381
Length=24879
Score = 161 bits (178), Expect = 4e-37
Identities = 113/129 (88%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
|||||| ||||| |||||||||||||||||||||||| || |||| |||||||||||
Sbjct 10374 GAGCATGCATGTTGAGACCCGAAAGATGGTGAACTATGCTTGCGTAGGTTGAAGCCAGAG 10433
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
|||||||||||||||| || |||| ||||| |||||||||||||||||||| || |||
Sbjct 10434 GAAACTCTGGTGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGTCAAACGTGAGTA 10493
Query 675 TAGGGGCGA 683
|||||||||
Sbjct 10494 TAGGGGCGA 10502
>seq280
Length=5146
Score = 161 bits (178), Expect = 4e-37
Identities = 113/129 (88%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
|||||| ||||| |||||||||||||||||||||||| || |||| |||||||||||
Sbjct 428 GAGCATGCATGTTGAGACCCGAAAGATGGTGAACTATGCTTGCGTAGGTTGAAGCCAGAG 369
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
|||||||||||||||| || |||| ||||| |||||||||||||||||||| || |||
Sbjct 368 GAAACTCTGGTGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGTCAAACGTGAGTA 309
Query 675 TAGGGGCGA 683
|||||||||
Sbjct 308 TAGGGGCGA 300
>seq208
Length=41862
Score = 161 bits (178), Expect = 4e-37
Identities = 113/129 (88%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
|||||| ||||| |||||||||||||||||||||||| || |||| |||||||||||
Sbjct 25782 GAGCATGCATGTTGAGACCCGAAAGATGGTGAACTATGCTTGCGTAGGTTGAAGCCAGAG 25723
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
|||||||||||||||| || |||| ||||| |||||||||||||||||||| || |||
Sbjct 25722 GAAACTCTGGTGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGTCAAACGTGAGTA 25663
Query 675 TAGGGGCGA 683
|||||||||
Sbjct 25662 TAGGGGCGA 25654
>seq1211
Length=11859842
Score = 147 bits (162), Expect = 9e-33
Identities = 110/129 (85%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
|||||| || || | |||||||||| ||||||||||| || |||| |||| ||||||
Sbjct 5040349 GAGCATGCATGATGAGCCCCGAAAGATTGTGAACTATGCTTGCGTAGGTTGAAACCAGAG 5040408
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
|||||||||||||||| || |||| ||||||||||||||||||||| |||| ||||||
Sbjct 5040409 GAAACTCTGGTGGAGGACCGTAGCGATTCTGGCGTGCAAATCGATCGCCAAACGTGGGTA 5040468
Query 675 TAGGGGCGA 683
|||||||||
Sbjct 5040469 TAGGGGCGA 5040477
Score = 147 bits (162), Expect = 9e-33
Identities = 110/129 (85%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
|||||| || || | |||||||||| ||||||||||| || |||| |||| ||||||
Sbjct 5083278 GAGCATGCATGATGAGCCCCGAAAGATTGTGAACTATGCTTGCGTAGGTTGAAACCAGAG 5083219
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
|||||||||||||||| || |||| ||||||||||||||||||||| |||| ||||||
Sbjct 5083218 GAAACTCTGGTGGAGGACCGTAGCGATTCTGGCGTGCAAATCGATCGCCAAACGTGGGTA 5083159
Query 675 TAGGGGCGA 683
|||||||||
Sbjct 5083158 TAGGGGCGA 5083150
>seq1215
Length=4267853
Score = 140 bits (154), Expect = 1e-30
Identities = 103/120 (86%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
||||| || ||||||| ||||||||||||| || |||| |||||||||||||||||||
Sbjct 957347 TGTTGAGATCCGAAAGGTGGTGAACTATGCTTGCGTAGGTCGAAGCCAGAGGAAACTCTG 957406
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| | |||| ||||| |||||||||||||||||||| || ||||||||||||
Sbjct 957407 GTGGAGGACCATAGCGATTCTGACGTGCAAATCGATCGTCAAACGTGAGTATAGGGGCGA 957466
>seq858
Length=23843
Score = 120 bits (132), Expect = 1e-24
Identities = 84/96 (88%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 588 CTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGC 647
|||||| || |||| ||||||||||||||||||||||||||| || |||| ||||| |
Sbjct 17320 CTATGCTTGCGTAGGTTGAAGCCAGAGGAAACTCTGGTGGAGGACCGTAGCGATTCTGAC 17261
Query 648 GTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||||||||||||||| || ||||||||||||
Sbjct 17260 GTGCAAATCGATCGTCAAACGTGAGTATAGGGGCGA 17225
>seq597
Length=45338
Score = 120 bits (132), Expect = 1e-24
Identities = 84/96 (88%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 588 CTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGC 647
|||||| || |||| ||||||||||||||||||||||||||| || |||| ||||| |
Sbjct 8330 CTATGCTTGCGTAGGTTGAAGCCAGAGGAAACTCTGGTGGAGGACCGTAGCGATTCTGAC 8271
Query 648 GTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||||||||||||||| || ||||||||||||
Sbjct 8270 GTGCAAATCGATCGTCAAACGTGAGTATAGGGGCGA 8235
>seq532
Length=10363
Score = 120 bits (132), Expect = 1e-24
Identities = 84/96 (88%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 588 CTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGC 647
|||||| || |||| ||||||||||||||||||||||||||| || |||| ||||| |
Sbjct 3673 CTATGCTTGCGTAGGTTGAAGCCAGAGGAAACTCTGGTGGAGGACCGTAGCGATTCTGAC 3614
Query 648 GTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||||||||||||||| || ||||||||||||
Sbjct 3613 GTGCAAATCGATCGTCAAACGTGAGTATAGGGGCGA 3578
>seq245
Length=9392
Score = 120 bits (132), Expect = 1e-24
Identities = 84/96 (88%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 588 CTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGC 647
|||||| || |||| ||||||||||||||||||||||||||| || |||| ||||| |
Sbjct 6918 CTATGCTTGCGTAGGTTGAAGCCAGAGGAAACTCTGGTGGAGGACCGTAGCGATTCTGAC 6859
Query 648 GTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||||||||||||||| || ||||||||||||
Sbjct 6858 GTGCAAATCGATCGTCAAACGTGAGTATAGGGGCGA 6823
>seq612
Length=2605
Score = 95.1 bits (104), Expect = 5e-17
Identities = 91/114 (80%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 572 CCCGAAAGA-TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG-GAAACTCTGGTGGAG 629
||||||||| |||||| |||||| || ||| |||||||||| || ||| ||||||||
Sbjct 301 CCCGAAAGAGTGGTGAGCTATGCTTGCGTAGCAAGAAGCCAGAGAGACACTATGGTGGAG 360
Query 630 GCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
| || |||| ||| | || |||||||||||||||| | ||||||||||||
Sbjct 361 GACCGTAGCGATTCGGACGCACAAATCGATCGTCAAACGGGAGTATAGGGGCGA 414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079973895350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |