Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015- 12-10] 1,217 sequences; 114,963,228 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq1217 91.5 7e-17 seq1214 91.5 7e-17 seq1069 91.5 7e-17 seq1019 91.5 7e-17 seq878 91.5 7e-17 seq395 91.5 7e-17 seq381 91.5 7e-17 seq280 91.5 7e-17 seq208 91.5 7e-17 seq205 91.5 7e-17 seq1210 87.8 8e-16 seq1025 84.2 1e-14 seq1211 82.4 4e-14 seq1213 78.8 4e-13 >seq1217 Length=794059 Score = 91.5 bits (100), Expect = 7e-17 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| ||||||| ||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct 59393 GGAGAAGAAACCAACCAGGATTCCCTCAGTAACGGCGAGTGAAGAGGGAGAAGCCCAGCA 59334 Query 61 CCGAATCC 68 ||||| || Sbjct 59333 CCGAAGCC 59326 >seq1214 Length=6203119 Score = 91.5 bits (100), Expect = 7e-17 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| ||||||| ||||||||||||||||||||||||||||||| ||||| ||||||| | Sbjct 6035323 GGAGAAGAAACCAACCAGGATTCCCTCAGTAACGGCGAGTGAAGAGGGAGAAGCCCAGTG 6035382 Query 61 CCGAATCC 68 ||||| || Sbjct 6035383 CCGAAGCC 6035390 Score = 91.5 bits (100), Expect = 7e-17 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| ||||||| ||||||||||||||||||||||||||||||| ||||| ||||||| | Sbjct 6144240 GGAGAAGAAACCAACCAGGATTCCCTCAGTAACGGCGAGTGAAGAGGGAGAAGCCCAGTG 6144299 Query 61 CCGAATCC 68 ||||| || Sbjct 6144300 CCGAAGCC 6144307 >seq1069 Length=9581 Score = 91.5 bits (100), Expect = 7e-17 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| ||||||| ||||||||||||||||||||||||||||||| ||||| ||||||| | Sbjct 8486 GGAGAAGAAACCAACCAGGATTCCCTCAGTAACGGCGAGTGAAGAGGGAGAAGCCCAGTG 8427 Query 61 CCGAATCC 68 ||||| || Sbjct 8426 CCGAAGCC 8419 >seq1019 Length=1504 Score = 91.5 bits (100), Expect = 7e-17 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| ||||||| ||||||||||||||||||||||||||||||| ||||| ||||||| | Sbjct 103 GGAGAAGAAACCAACCAGGATTCCCTCAGTAACGGCGAGTGAAGAGGGAGAAGCCCAGTG 162 Query 61 CCGAATCC 68 ||||| || Sbjct 163 CCGAAGCC 170 >seq878 Length=3344 Score = 91.5 bits (100), Expect = 7e-17 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| ||||||| ||||||||||||||||||||||||||||||| ||||| ||||||| | Sbjct 2110 GGAGAAGAAACCAACCAGGATTCCCTCAGTAACGGCGAGTGAAGAGGGAGAAGCCCAGTG 2169 Query 61 CCGAATCC 68 ||||| || Sbjct 2170 CCGAAGCC 2177 >seq395 Length=6286 Score = 91.5 bits (100), Expect = 7e-17 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| ||||||| ||||||||||||||||||||||||||||||| ||||| ||||||| | Sbjct 750 GGAGAAGAAACCAACCAGGATTCCCTCAGTAACGGCGAGTGAAGAGGGAGAAGCCCAGTG 691 Query 61 CCGAATCC 68 ||||| || Sbjct 690 CCGAAGCC 683 >seq381 Length=24879 Score = 91.5 bits (100), Expect = 7e-17 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| ||||||| ||||||||||||||||||||||||||||||| ||||| ||||||| | Sbjct 8679 GGAGAAGAAACCAACCAGGATTCCCTCAGTAACGGCGAGTGAAGAGGGAGAAGCCCAGTG 8738 Query 61 CCGAATCC 68 ||||| || Sbjct 8739 CCGAAGCC 8746 >seq280 Length=5146 Score = 91.5 bits (100), Expect = 7e-17 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| ||||||| ||||||||||||||||||||||||||||||| ||||| ||||||| | Sbjct 2115 GGAGAAGAAACCAACCAGGATTCCCTCAGTAACGGCGAGTGAAGAGGGAGAAGCCCAGTG 2056 Query 61 CCGAATCC 68 ||||| || Sbjct 2055 CCGAAGCC 2048 >seq208 Length=41862 Score = 91.5 bits (100), Expect = 7e-17 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| ||||||| ||||||||||||||||||||||||||||||| ||||| ||||||| | Sbjct 27495 GGAGAAGAAACCAACCAGGATTCCCTCAGTAACGGCGAGTGAAGAGGGAGAAGCCCAGTG 27436 Query 61 CCGAATCC 68 ||||| || Sbjct 27435 CCGAAGCC 27428 >seq205 Length=7450 Score = 91.5 bits (100), Expect = 7e-17 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| ||||||| ||||||||||||||||||||||||||||||| ||||| ||||||| | Sbjct 1598 GGAGAAGAAACCAACCAGGATTCCCTCAGTAACGGCGAGTGAAGAGGGAGAAGCCCAGTG 1539 Query 61 CCGAATCC 68 ||||| || Sbjct 1538 CCGAAGCC 1531 >seq1210 Length=13762452 Score = 87.8 bits (96), Expect = 8e-16 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| ||||||| |||||||||| |||||||||||||||||||| ||||| |||||||| Sbjct 8093503 GGAGAAGAAACCAACCAGGATTACCTCAGTAACGGCGAGTGAAGAGGGAGAAGCCCAGCA 8093444 Query 61 CCGAATCC 68 ||||| || Sbjct 8093443 CCGAAGCC 8093436 Score = 87.8 bits (96), Expect = 8e-16 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| ||||||| ||||||||||||||||||||||||||||||| ||||| ||||||| | Sbjct 9899317 GGAGAAGAAACCAACCAGGATTCCCTCAGTAACGGCGAGTGAAGAGGGAGAAGCCCAGTG 9899376 Query 61 CCGAATCC 68 | ||| || Sbjct 9899377 CAGAAGCC 9899384 >seq1025 Length=4019 Score = 84.2 bits (92), Expect = 1e-14 Identities = 60/68 (88%), Gaps = 1/68 (1%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| ||||| | ||||||||||||||||||||||||||||||| ||||| ||||||| | Sbjct 1117 GGAGAAGAACC-AACCAGGATTCCCTCAGTAACGGCGAGTGAAGAGGGAGAAGCCCAGTG 1059 Query 61 CCGAATCC 68 ||||| || Sbjct 1058 CCGAAGCC 1051 >seq1211 Length=11859842 Score = 82.4 bits (90), Expect = 4e-14 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| ||||||| || |||||||||||||||| ||||||||||| ||||| |||||||| Sbjct 5048988 GGAGAAGAAACCAAGCAGGATTCCCTCAGTATCGGCGAGTGAAGAGGGAGAAGCCCAGCA 5048929 Query 61 CCGAA 65 ||||| Sbjct 5048928 CCGAA 5048924 Score = 82.4 bits (90), Expect = 4e-14 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| ||||||| || |||||||||||||||| ||||||||||| ||||| |||||||| Sbjct 5074639 GGAGAAGAAACCAAGCAGGATTCCCTCAGTATCGGCGAGTGAAGAGGGAGAAGCCCAGCA 5074698 Query 61 CCGAA 65 ||||| Sbjct 5074699 CCGAA 5074703 >seq1213 Length=7437389 Score = 78.8 bits (86), Expect = 4e-13 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| ||||||| |||||||||||||||||||||| ||||||| ||||| ||||||| Sbjct 5206210 GGAGAAGAAACCGACCAGGATTCCCTCAGTAACGGTGAGTGAAGAGGGAGAAGCCCAGTA 5206151 Query 61 CCGAATCC 68 ||||| || Sbjct 5206150 CCGAAGCC 5206143 Score = 78.8 bits (86), Expect = 4e-13 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| ||||||| |||||||||||||||||||||| ||||||| ||||| ||||||| Sbjct 5290596 GGAGAAGAAACCGACCAGGATTCCCTCAGTAACGGTGAGTGAAGAGGGAGAAGCCCAGTA 5290655 Query 61 CCGAATCC 68 ||||| || Sbjct 5290656 CCGAAGCC 5290663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230397371280