Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015-
12-10] 1,217 sequences; 114,963,228 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq1217 82.4 1e-13
seq1214 82.4 1e-13
seq1209 82.4 1e-13
seq1150 82.4 1e-13
seq1112 82.4 1e-13
seq673 82.4 1e-13
seq597 82.4 1e-13
seq532 82.4 1e-13
seq528 82.4 1e-13
seq381 82.4 1e-13
seq62 82.4 1e-13
seq1212 77.0 5e-12
seq208 77.0 5e-12
seq1210 73.4 6e-11
>seq1217
Length=794059
Score = 82.4 bits (90), Expect = 1e-13
Identities = 93/122 (76%), Gaps = 2/122 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| || | ||| || | | || |
Sbjct 62689 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGCATGTGCCTGGTCGATCGGCCAAT 62746
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||| ||||||||||| |||||| | ||||||||||||||||| |||||| |||
Sbjct 62747 GGTGCGAGGCTACCATCTGAGGGATTAAGACTGAACGCCTCTAAGTCTGAATCCCATCCA 62806
Query 121 GA 122
||
Sbjct 62807 GA 62808
>seq1214
Length=6203119
Score = 82.4 bits (90), Expect = 1e-13
Identities = 93/122 (76%), Gaps = 2/122 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| || | ||| || | | || |
Sbjct 6039852 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTACATGTGCCTGGTCGATCGGCCAAT 6039909
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||| ||||||||||| |||||| | ||||||||||||||||| |||||| |||
Sbjct 6039910 GGTGCGAGGCTACCATCTGGGGGATTAAGACTGAACGCCTCTAAGTCTGAATCCCGTCCA 6039969
Query 121 GA 122
||
Sbjct 6039970 GA 6039971
Score = 82.4 bits (90), Expect = 1e-13
Identities = 93/122 (76%), Gaps = 2/122 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| || | ||| || | | || |
Sbjct 6148758 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTACATGTGCCTGGTCGATCGGCCAAT 6148815
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||| ||||||||||| |||||| | ||||||||||||||||| |||||| |||
Sbjct 6148816 GGTGCGAGGCTACCATCTGGGGGATTAAGACTGAACGCCTCTAAGTCTGAATCCCGTCCA 6148875
Query 121 GA 122
||
Sbjct 6148876 GA 6148877
>seq1209
Length=14622995
Score = 82.4 bits (90), Expect = 1e-13
Identities = 93/122 (76%), Gaps = 2/122 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| || | ||| || | | || |
Sbjct 11990730 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTACATGTGCCTGGTCGATCGGCCAAT 11990787
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||| ||||||||||| |||||| | ||||||||||||||||| |||||| |||
Sbjct 11990788 GGTGCGAGGCTACCATCTGAGGGATTAAGACTGAACGCCTCTAAGTCTGAATCCCATCCA 11990847
Query 121 GA 122
||
Sbjct 11990848 GA 11990849
Score = 73.4 bits (80), Expect = 6e-11
Identities = 93/123 (76%), Gaps = 4/123 (3%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||| | |||| | |||||| | ||||| || | ||| || | | || |
Sbjct 14434755 GTACGAGAGAAGCCGCAGG-TTCAGAC-ATTTGGTACATGTGCCTGGTCGATCGGCCAAT 14434812
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAG-AATCCATGCC 119
| |||| ||||||||||| |||||| | ||||||||||||||||| | ||||||| ||
Sbjct 14434813 GGTGCGAGGCTACCATCTGAGGGATTAAGACTGAACGCCTCTAAGTCTGAAATCCAT-CC 14434871
Query 120 AGA 122
|||
Sbjct 14434872 AGA 14434874
>seq1150
Length=7614
Score = 82.4 bits (90), Expect = 1e-13
Identities = 93/122 (76%), Gaps = 2/122 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| || | ||| || | | || |
Sbjct 5914 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTACATGTGCCTGGTCGATCGGCCAAT 5857
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||| ||||||||||| |||||| | ||||||||||||||||| |||||| |||
Sbjct 5856 GGTGCGAGGCTACCATCTGGGGGATTAAGACTGAACGCCTCTAAGTCTGAATCCCGTCCA 5797
Query 121 GA 122
||
Sbjct 5796 GA 5795
>seq1112
Length=4721
Score = 82.4 bits (90), Expect = 1e-13
Identities = 93/122 (76%), Gaps = 2/122 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| || | ||| || | | || |
Sbjct 2658 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTACATGTGCCTGGTCGATCGGCCAAT 2601
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||| ||||||||||| |||||| | ||||||||||||||||| |||||| |||
Sbjct 2600 GGTGCGAGGCTACCATCTGGGGGATTAAGACTGAACGCCTCTAAGTCTGAATCCCGTCCA 2541
Query 121 GA 122
||
Sbjct 2540 GA 2539
>seq673
Length=2341
Score = 82.4 bits (90), Expect = 1e-13
Identities = 93/122 (76%), Gaps = 2/122 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| || | ||| || | | || |
Sbjct 1996 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTACATGTGCCTGGTCGATCGGCCAAT 1939
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||| ||||||||||| |||||| | ||||||||||||||||| |||||| |||
Sbjct 1938 GGTGCGAGGCTACCATCTGGGGGATTAAGACTGAACGCCTCTAAGTCTGAATCCCGTCCA 1879
Query 121 GA 122
||
Sbjct 1878 GA 1877
>seq597
Length=45338
Score = 82.4 bits (90), Expect = 1e-13
Identities = 93/122 (76%), Gaps = 2/122 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| || | ||| || | | || |
Sbjct 5541 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTACATGTGCCTGGTCGATCGGCCAAT 5484
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||| ||||||||||| |||||| | ||||||||||||||||| |||||| |||
Sbjct 5483 GGTGCGAGGCTACCATCTGGGGGATTAAGACTGAACGCCTCTAAGTCTGAATCCCGTCCA 5424
Query 121 GA 122
||
Sbjct 5423 GA 5422
>seq532
Length=10363
Score = 82.4 bits (90), Expect = 1e-13
Identities = 93/122 (76%), Gaps = 2/122 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| || | ||| || | | || |
Sbjct 908 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTACATGTGCCTGGTCGATCGGCCAAT 851
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||| ||||||||||| |||||| | ||||||||||||||||| |||||| |||
Sbjct 850 GGTGCGAGGCTACCATCTGGGGGATTAAGACTGAACGCCTCTAAGTCTGAATCCCGTCCA 791
Query 121 GA 122
||
Sbjct 790 GA 789
>seq528
Length=7863
Score = 82.4 bits (90), Expect = 1e-13
Identities = 93/122 (76%), Gaps = 2/122 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| || | ||| || | | || |
Sbjct 5165 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTACATGTGCCTGGTCGATCGGCCAAT 5108
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||| ||||||||||| |||||| | ||||||||||||||||| |||||| |||
Sbjct 5107 GGTGCGAGGCTACCATCTGGGGGATTAAGACTGAACGCCTCTAAGTCTGAATCCCGTCCA 5048
Query 121 GA 122
||
Sbjct 5047 GA 5046
>seq381
Length=24879
Score = 82.4 bits (90), Expect = 1e-13
Identities = 93/122 (76%), Gaps = 2/122 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| || | ||| || | | || |
Sbjct 13194 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTACATGTGCCTGGTCGATCGGCCAAT 13251
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||| ||||||||||| |||||| | ||||||||||||||||| |||||| |||
Sbjct 13252 GGTGCGAGGCTACCATCTGGGGGATTAAGACTGAACGCCTCTAAGTCTGAATCCCGTCCA 13311
Query 121 GA 122
||
Sbjct 13312 GA 13313
>seq62
Length=2832
Score = 82.4 bits (90), Expect = 1e-13
Identities = 93/122 (76%), Gaps = 2/122 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| || | ||| || | | || |
Sbjct 234 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTACATGTGCCTGGTCGATCGGCCAAT 291
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||| ||||||||||| |||||| | ||||||||||||||||| |||||| |||
Sbjct 292 GGTGCGAGGCTACCATCTGGGGGATTAAGACTGAACGCCTCTAAGTCTGAATCCCGTCCA 351
Query 121 GA 122
||
Sbjct 352 GA 353
>seq1212
Length=7212195
Score = 77.0 bits (84), Expect = 5e-12
Identities = 94/123 (76%), Gaps = 4/123 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCT-GTCTGACCAGGCAG 59
||||||||||||| || | |||||| | ||||| || | || ||| || | | ||
Sbjct 762427 GTACGAGAGGAACTGCAGG-TTCAGAC-ATTTGGTACATGTGCCTAGTC-GATCGGTCAA 762371
Query 60 TGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCC 119
|| |||| ||||||||||| |||||| | ||||||||||||||||| |||||| ||
Sbjct 762370 TGGTGCGAGGCTACCATCTGGGGGATTAAGACTGAACGCCTCTAAGTCTGAATCCCGTCC 762311
Query 120 AGA 122
|||
Sbjct 762310 AGA 762308
>seq208
Length=41862
Score = 77.0 bits (84), Expect = 5e-12
Identities = 94/123 (76%), Gaps = 4/123 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCT-GTCTGACCAGGCAG 59
||||||||||||| || | |||||| | ||||| || | || ||| || | | ||
Sbjct 22960 GTACGAGAGGAACTGCAGG-TTCAGAC-ATTTGGTACATGTGCCTAGTC-GATCGGTCAA 22904
Query 60 TGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCC 119
|| |||| ||||||||||| |||||| | ||||||||||||||||| |||||| ||
Sbjct 22903 TGGTGCGAGGCTACCATCTGGGGGATTAAGACTGAACGCCTCTAAGTCTGAATCCCGTCC 22844
Query 120 AGA 122
|||
Sbjct 22843 AGA 22841
>seq1210
Length=13762452
Score = 73.4 bits (80), Expect = 6e-11
Identities = 91/122 (75%), Gaps = 2/122 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| || | ||| || | | || |
Sbjct 8089253 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTACATGTGCCTGGTCGATCGGCCAAT 8089196
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| ||| | ||||||||| |||||| | ||||||||||||||||| |||||| |||
Sbjct 8089195 GGTGCGGGGGTACCATCTGAGGGATTAAGACTGAACGCCTCTAAGTCTGAATCCCGTCCA 8089136
Query 121 GA 122
||
Sbjct 8089135 GA 8089134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819190341888
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