Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinostoma_20caproni_20[genbank_20GCA_5F000950555.1_202014-10-12] 86,083 sequences; 834,556,378 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq32408 111 7e-22 >seq32408 Length=5857 Score = 111 bits (122), Expect = 7e-22 Identities = 75/84 (89%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 600 AGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGAT 659 ||| | ||||||||||||||||||||||||| ||||||| ||||| ||||||||||||| Sbjct 3930 AGGATAAAGCCAGAGGAAACTCTGGTGGAGGACCGCAGCGATTCTGACGTGCAAATCGAT 3871 Query 660 CGTCAAATTTGGGTATAGGGGCGA 683 ||||||| || |||||||||||| Sbjct 3870 CGTCAAACGTGAGTATAGGGGCGA 3847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2078153519650