Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinostoma_20caproni_20[genbank_20GCA_5F000950555.1_202014-10-12] 86,083 sequences; 834,556,378 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq3124 84.2 3e-14 >seq3124 Length=47935 Score = 84.2 bits (92), Expect = 3e-14 Identities = 84/107 (79%), Gaps = 3/107 (3%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||| |||||||||||| | | ||| ||| Sbjct 1278 AAACCAACAAAATAGAACCGAA-GTCCTATTCCATTATTCCATGCAAGAATTTTCAGGCA 1220 Query 70 TAA--GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTG 114 || ||||||||||| ||||| ||||| |||| ||||| || ||| Sbjct 1219 CAAAGGCCTGCTTTGAGCACTCAAATTTGTTCAAAGTAAACGTGCTG 1173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594703645422