Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Echinostoma_20caproni_20[genbank_20GCA_5F000950555.1_202014-10-12]
86,083 sequences; 834,556,378 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq3124 122 9e-26
>seq3124
Length=47935
Score = 122 bits (134), Expect = 9e-26
Identities = 139/183 (76%), Gaps = 4/183 (2%)
Strand=Plus/Plus
Query 6 CAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTT--TGCTCGAATACAT 63
||| || ||||||||||| ||||| ||| | |||||||||||||| ||| ||| |
Sbjct 1173 CAGCACGTTTACTTTGAACAAATTTGAGTGCTCAAAGCAGGCCTTTGTGCCTGAAAATTC 1232
Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG 123
| ||||||||||| ||||||||| | |||||||||||||| ||||| | ||| | |
Sbjct 1233 TTGCATGGAATAATGGAATAGGAC-TTCGGTTCTATTTTGTTGGTTT-TCGGATCCGAAG 1290
Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183
||||| | || | ||| || |||||| | |||| ||| | ||||||||||||||
Sbjct 1291 TAATGGTTAAGAGGGACAGACGGGGGCATTTGTATGGCGGTGTTAGAGGTGAAATTCTTG 1350
Query 184 GAT 186
|||
Sbjct 1351 GAT 1353
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511573028320
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