Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fasciola_20hepatica_20[genbank_20GCA_5F000947175.1_202014-12-01] 20,158 sequences; 1,275,107,963 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq19712 500 3e-139 >seq19712 Length=3212 Score = 500 bits (554), Expect = 3e-139 Identities = 415/499 (83%), Gaps = 6/499 (1%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| || |||||||||||||||||||||| ||||||||||||||||||||| Sbjct 2535 TACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 2594 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATC-CTCTGACCCCT 119 |||||||||||||| |||||||| |||||||||||| |||||||| || ||||| | Sbjct 2595 GTGGTTTAATTCGACGCAACGCGCAGAACCTTACCAGCCCTTGACATGTCTATGACCGGT 2654 Query 120 -CTAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTC 178 | |||||| || ||||| ||||||| | |||| ||||||| ||||||| ||||||| Sbjct 2655 ACCAGAGATGGAACCTTCCC-TTCGGGGCATAGAGC-ACAGGTGCTGCATGGCTGTCGTC 2712 Query 179 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTT 238 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 2713 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCCGTCCTTAGTT 2772 Query 239 GCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCG-GAGGAAGGTGGG 297 || | |||| ||||| |||||||||| |||||||||||| || ||| |||||||||||| Sbjct 2773 GCTACCATTTAGTTGAGCACTCTAAGGAGACTGCCGGTGATAAGCCGCGAGGAAGGTGGG 2832 Query 298 GACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAA 357 || |||||||| || ||||| |||||| | |||||||||||||||||||||||| Sbjct 2833 GATGACGTCAAGTCCTCATGGCCCTTACGGGCTGGGCTACACACGTGCTACAATGGCGGT 2892 Query 358 TACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGA 417 |||| ||| || || || | ||||||| || |||| | |||||||||||| Sbjct 2893 GACAATGGGACGCTAAGGGGCAACCCTTCGCAAATCTCAAAAAGCCG-TCTCAGTTCGGA 2951 Query 418 TTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGC 477 ||| |||||||||||| |||||| ||||||||||||||||||| ||||||||||| Sbjct 2952 TTGGGCTCTGCAACTCGAGCCCATGAAGTTGGAATCGCTAGTAATCGTGGATCAGCATGC 3011 Query 478 TACGGTGAATACGTTCCCG 496 |||||||||||||||||| Sbjct 3012 CACGGTGAATACGTTCCCG 3030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503696823680