Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fasciola_20hepatica_20[genbank_20GCA_5F000947175.1_202014-12-01] 20,158 sequences; 1,275,107,963 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq19712 104 2e-20 >seq19712 Length=3212 Score = 104 bits (114), Expect = 2e-20 Identities = 123/163 (75%), Gaps = 4/163 (2%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACA-CTTTCTGGGATTAGCTCCCCCTCGC 59 |||||||||||| ||||||| ||| || || |||| || |||| || | || Sbjct 2969 TCGAGTTGCAGAGCCCAATCCGAACT--GAGACGGCTTTTTGAGATTTGCGAAGGGTTGC 2912 Query 60 GGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCC 119 || ||| ||| ||| |||||||| ||||||| ||||| ||| |||||||| Sbjct 2911 CCCTTAGCGTCCCATTGTCACCGCCATTGTAGCACGTGTGTAGCCCAGCCCGTAAGGGCC 2852 Query 120 ATGAGGACTTGACGTCATCCCCACCTTCCTC-CGGTTTGTCAC 161 ||||||||||||||||||||||||||||||| ||| || |||| Sbjct 2851 ATGAGGACTTGACGTCATCCCCACCTTCCTCGCGGCTTATCAC 2809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415918763260