Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Girardia_20tigrina_20[genbank_20GCA_5F001938485.1_202017-01-06] 255,254 sequences; 1,428,149,015 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq177683 78.8 2e-12 seq77932 77.0 8e-12 seq43421 77.0 8e-12 seq241975 73.4 1e-10 seq195826 73.4 1e-10 >seq177683 Length=12971 Score = 78.8 bits (86), Expect = 2e-12 Identities = 76/97 (78%), Gaps = 3/97 (3%) Strand=Plus/Minus Query 274 TTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTA 333 ||||| | |||||| |||| ||| | | ||||||||| |||||||||||||||||| Sbjct 6859 TTTCACGTACTATTTAACTC---TCTTCAGAGTTCTTTTCACCTTTCCCTCACGGTACTT 6803 Query 334 GTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 ||| ||||||| | || ||||||||||||| || Sbjct 6802 GTTTGCTATCGGACTTACACAAGTATTTAGCCTTAGA 6766 >seq77932 Length=1126 Score = 77.0 bits (84), Expect = 8e-12 Identities = 76/97 (78%), Gaps = 1/97 (1%) Strand=Plus/Minus Query 274 TTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTA 333 ||||| | |||||| |||| | ||| | | ||||||||| ||||||||||||||||| Sbjct 1018 TTTCACGTACTATTTAACTCTC-TCTTCAGAGTTCTTTTCAACTTTCCCTCACGGTACTT 960 Query 334 GTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 ||| ||||||| | || ||||||||||||| || Sbjct 959 GTTTGCTATCGGACTTACACAAGTATTTAGCCTTAGA 923 >seq43421 Length=1318 Score = 77.0 bits (84), Expect = 8e-12 Identities = 76/97 (78%), Gaps = 1/97 (1%) Strand=Plus/Minus Query 274 TTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTA 333 ||||| | |||||| |||| | ||| | | ||||||||| ||||||||||||||||| Sbjct 1023 TTTCACGTACTATTTAACTCTC-TCTTCAGAGTTCTTTTCAACTTTCCCTCACGGTACTT 965 Query 334 GTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 ||| ||||||| | || ||||||||||||| || Sbjct 964 GTTTGCTATCGGACTTACACAAGTATTTAGCCTTAGA 928 >seq241975 Length=2190 Score = 73.4 bits (80), Expect = 1e-10 Identities = 77/100 (77%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 271 CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTA 330 || ||||| | |||||| |||| | ||| | ||||||||| ||||||||||||||| Sbjct 664 CGATTTCACGTACTATTTAACTCTC-TCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTA 606 Query 331 CTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 || ||| ||||||| | || ||||||||||||| || Sbjct 605 CTTGTTTGCTATCGGACTCACACAAGTATTTAGCCTTAGA 566 >seq195826 Length=6562 Score = 73.4 bits (80), Expect = 1e-10 Identities = 77/100 (77%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 271 CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTA 330 || ||||| | |||||| |||| | ||| | |||||||||| |||||| |||||||| Sbjct 3418 CGATTTCACGTACTATTTAACTCTC-TCTTCAAAGTTCTTTTCGACTTTCCTTCACGGTA 3360 Query 331 CTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 || ||| ||||||| | || ||||||||||||| || Sbjct 3359 CTTGTTTGCTATCGGACTCACACAAGTATTTAGCCTTAGA 3320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1238430766336