Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq1 118 2e-24 >seq1 Length=50294 Score = 118 bits (130), Expect = 2e-24 Identities = 231/332 (70%), Gaps = 16/332 (5%) Strand=Plus/Plus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||||||| |||||| | | |||| ||| ||||||||| || | | Sbjct 25331 AGGGGAGTGAAATAGATCCTGAAACTCTGTGCCTTCAAAGAGTCGGAGCCC-GTAAG--G 25387 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACC--AGCGAGGTTAA 128 |||||||||||||||||| | || || || |||| ||| ||| | || ||||||| Sbjct 25388 GTGACGGCGTGCCTTTTGGAGAAGGAACCAACGACTTA--CGTATGCGTGGCAAGGTTAA 25445 Query 129 GGG-CTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGG 187 ||| || | |||| ||||| || |||| | || || || ||||||| | | || Sbjct 25446 GGGAGTTTACACCCG-GAGCCGTAGGGAAACCAAGTCTGAATAGGGCGA--ATTCAGTCA 25502 Query 188 CG----CTAGACGCGAAA-CCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACG 242 || ||||| ||||| || ||||| |||| || | |||| ||||| | |||| Sbjct 25503 CGTATAGTAGACCCGAAACCCGTGTGAGCTACTCATGCCCAGGCTGAAGGTGGGGTACAA 25562 Query 243 CGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGG 302 | | |||||| ||||||| | | | || || | | |||||| | | ||||| | Sbjct 25563 CCTACTGGAGGGCCGAACCATTTAGAGCTGCAAGTCTATTGGATGAGGTGTGAGTAGGAG 25622 Query 303 TGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 ||||| || |||| ||| |||| |||||| || Sbjct 25623 TGAAAAGCTAATCGAACCGGGAGATAGCTGGT 25654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972740902400