Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq2140 102 1e-19 seq4788 77.0 6e-12 >seq2140 Length=1087 Score = 102 bits (112), Expect = 1e-19 Identities = 100/127 (79%), Gaps = 3/127 (2%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98 ||||| || | |||||| | | | | ||| || ||||||||||| ||||| ||||| | Sbjct 958 ATGCCTTTAATCGGGTGTTCAGTGTGGACAGCACGTTTACTTTGAACAAATTTGAGTGCT 1017 Query 99 CAAAGCAGGCCT--TTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTT 156 |||||||||||| |||| ||| | | |||||||||||||||||||||| | |||| Sbjct 1018 CAAAGCAGGCCTTGTTGCCTGAAAAGTCTTGCATGGAATAATAGAATAGGAC-TTCGGTC 1076 Query 157 CTATTTT 163 ||||||| Sbjct 1077 CTATTTT 1083 >seq4788 Length=4699 Score = 77.0 bits (84), Expect = 6e-12 Identities = 94/127 (74%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||| ||||| | |||||| | ||||| | |||||||||||||||||| Sbjct 4686 ATGATTAAGAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 4627 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 ||||| || | |||||||| || ||||| |||||||||||||||| ||| Sbjct 4626 CCGGCGCAAGACGGACGAAAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAA 4568 Query 306 CGAAAGT 312 ||||||| Sbjct 4567 CGAAAGT 4561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915144401600