Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq1 212 2e-52 >seq1 Length=50294 Score = 212 bits (234), Expect = 2e-52 Identities = 245/330 (74%), Gaps = 0/330 (0%) Strand=Plus/Plus Query 8 GAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCG 67 || ||||||| |||| |||| |||||||||||||||||||||||| ||| |||||| Sbjct 23419 GAGGAATAAGGGGCGGCAAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGCCCCAAGCG 23478 Query 68 TTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAAT 127 ||| ||||||||||||||||||||||| | ||| |||| | ||| | |||||| Sbjct 23479 TTATCCGGAATTACTGGGCGTAAAGCGTCTGTAGGTGGTTCGGAAAGTCTCAAGTGAAAG 23538 Query 128 CCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGG 187 | ||||| |||| | | |||| | | ||| ||| ||||||| ||||| Sbjct 23539 GTCAGGGCTCAACCCTGTACTTGCTTGGGAAACTATCGAACTTGAGTGTGGGAGAGGCAA 23598 Query 188 GTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAG 247 | ||| | | | |||| ||| ||| ||| |||| | | ||| ||||| |||||| Sbjct 23599 GCAGAACTGTATGAGTAGGGGTGCAATCCGTTGATACATACAAGAATACCAAAAGCGAAG 23658 Query 248 GCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTA 307 ||||| |||| | | |||||| || | |||||||||||||||||||| |||||| Sbjct 23659 GCAGCTTGCTGGAACACTACTGACACTGAGAGACGAAAGCGTGGGGAGCAAAAGGGATTA 23718 Query 308 GATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||||| ||||||||||||||||||||| Sbjct 23719 GATACCCCTGTAGTCCACGCCCTAAACGAT 23748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289521656800