Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq1 288 2e-75 >seq1 Length=50294 Score = 288 bits (318), Expect = 2e-75 Identities = 287/370 (78%), Gaps = 19/370 (5%) Strand=Plus/Minus Query 5 CGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCG 64 |||||| || |||| ||| ||||||||||| | ||| ||||||||||||||| | || Sbjct 26883 CGGCATTTTTACCGATATTGCAATTTCACCGGGACTAAGCTTGAGACAGTGCCCAGACCG 26824 Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 26823 TTATGCCGTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 26764 Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGAT 184 |||||||||||||| |||| || || ||||| |||| || |||| || | Sbjct 26763 TATAGTTACGGCCGTCGTTCACCAGGACTTAATTTCAGAGC-----TTGC----ACCCCT 26713 Query 185 CCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGC 244 || | ||| |||| ||||||| ||||| ||| | | |||||||| |||||||| ||||| Sbjct 26712 CCACGTAATCTTCTGGCACCGGACAGGCATCACCCCATATACATCATCTTGCGATTTAGC 26653 Query 245 AGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCA-TAGA 303 | | ||||||||||||||||||||||| ||||| || ||||||||| ||| || | Sbjct 26652 ATGGAGCTGTGTTTTTGGTAAACAGTCGCCTGGGCTCGTTAGCTGCGGCCTCTCAGTAAA 26593 Query 304 --------CAGGCACCCCTTCTCCCTAAGTTACG-GGGTCATTTTGCCGAGTTCCTTAAC 354 ||||| ||| |||| |||||||| | ||||||| ||||||||||| Sbjct 26592 ATACTGAGGAGGCAGATCTTATCCCGAAGTTACGATCGCTATTTTGCAGAGTTCCTTAAG 26533 Query 355 AATAGTTCTC 364 ||||| || Sbjct 26532 CTTAGTTATC 26523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062335459200