Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq1 320 5e-85 >seq1 Length=50294 Score = 320 bits (354), Expect = 5e-85 Identities = 369/497 (74%), Gaps = 15/497 (3%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||||||| ||||||||| |||| ||||||||||||||||||| ||||| ||| Sbjct 23815 TACGGCCGCAAGGTTAAAACTCAAATGAATAGACGGGGACCCGCACAAGCAGTGGATCAT 23874 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| | | ||| |||||| ||| | |||||||| || Sbjct 23875 GTGGTTTAATTCGACACTAAACGAGGAACCTCACCTAGGCTTGACATTGATAGAAAGAAG 23934 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 |||| ||| | | | ||| ||| || ||||||| ||||||||||||||||| Sbjct 23935 TAGAAATACATCTGTGCCCGCAAGGGAACTTGAAAACAGGTGCTGCATGGTTGTCGTCAG 23994 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||| | |||| |||| |||||||||| |||||||||||||| | |||||| Sbjct 23995 CTCGTGCCTTGAGGTGTTCGGTTAAGTCCGTTAACGAGCGCAACCCATGTCGTTAGTT-- 24052 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 |||| || |||| ||||||| | | || | ||||||||||| ||| Sbjct 24053 ----ATTATGT--------CTAACGAGACTGCCTGAGTTAATCAGGAGGAAGGTGTGGAT 24100 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 |||||||||||| |||| |||||||| | ||||||||||| || |||||||| | ||| Sbjct 24101 GACGTCAAATCAGCATGGCCCTTATGCCTAGGGCTACACACATGATACAATGGTCGGTAC 24160 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 |||||| || | | | | | ||| ||||||| |||| | ||||||| | ||||| Sbjct 24161 AAAGGGTTGCAATATGGTAACATGGAGCCAATCCCAGAAAGCCGATCTCAGTCCAGATTG 24220 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC-ATGCTA 479 | |||||||||| | |||||| |||||| |||||||||||| |||||| ||| | Sbjct 24221 GGGGCTGCAACTCGCCCCCATGAAGTTGGAATTGCTAGTAATCGTGAATCAGCTATGTCA 24280 Query 480 CGGTGAATACGTTCCCG 496 |||||||| ||||||| Sbjct 24281 CGGTGAATCTGTTCCCG 24297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503908632000