Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq4788 284 2e-74 seq5247 131 3e-28 >seq4788 Length=4699 Score = 284 bits (314), Expect = 2e-74 Identities = 214/247 (87%), Gaps = 6/247 (2%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4065 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 4124 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG-CCAGCCACCAACCATAGTC 134 ||||||| | | | | | | ||||||||||||||| ||| ||| |||| | | Sbjct 4125 CAACTTCCTTCAGTTAGTCACTGAAAGTCCCTCTAAGAAGTCCAT--ACCTACCAAATTG 4182 Query 135 G-ATGGGG--CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAAT 191 | | | | |||||||||| | ||||||||||||||| ||||||||||||||||||| Sbjct 4183 GTAAGCAGAACTATTTAGCACGCGGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAAT 4242 Query 192 CACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct 4243 CACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAGAATCAAGAAAGAGCTCTCA 4302 Query 252 ATCTGTC 258 ||||||| Sbjct 4303 ATCTGTC 4309 >seq5247 Length=74922 Score = 131 bits (144), Expect = 3e-28 Identities = 96/112 (86%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 147 TAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA 206 || |||||| |||||||||||||||||||||||||||||| ||| |||| |||||| Sbjct 32920 TAACAGGTTTGAATCTCGTTCGTTATCGGAATTAACCAGACAATTCATACCACGAACTAA 32861 Query 207 GAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||| | ||| ||||||||||||| ||||||| |||| Sbjct 32860 GAACGGCCATGCACCACTATCCACCAAATCAAGAAAGAGTTATCAATATGTC 32809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796753107075