Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq1 188 3e-45 >seq1 Length=50294 Score = 188 bits (208), Expect = 3e-45 Identities = 300/420 (71%), Gaps = 28/420 (7%) Strand=Plus/Minus Query 135 ACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTC 194 ||||| |||||||| |||||| ||||||||||||||| | ||| |||| || |||| Sbjct 25683 ACGCTATACCTAAATATATTTCGCGGAGAACCAGCTATCTCCCGGTTCGATTAGCTTTTC 25624 Query 195 ACCCCTATCCACAGGTCATCCCCTCAGTTTTCAAC-CTAAGTGGGTTCGGTCCTCCACGC 253 || |||| |||| |||||| | || || | |||| | ||||||| |||||| Sbjct 25623 ACTCCTACTCACACCTCATCCAATAGACTTGCAGCTCTAAAT-GGTTCGGCCCTCCAGTA 25565 Query 254 GGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCAC-TTCGCTTCGGGTCT--TGAT 310 ||| ||||| ||||| |||| |||| ||| |||| | ||||||||| | Sbjct 25564 GGTTGTACCCCACCTTCAGCCTGGGCATGAGTAGCTCACACGGGTTTCGGGTCTACTATA 25505 Query 311 CGTGCCACT-CATACGCCCTATTCGGACTCGCTTTCGCTACGGCTAC---CCCACAC-GG 365 |||| ||| || |||||||||| |||| | |||| |||||||| | | || Sbjct 25504 CGTG--ACTGAATTCGCCCTATTCAGACTTGGTTTCCCTACGGCTCCGGGTGTAAACTCC 25447 Query 366 GTTAACCTCGCGACACA-ACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCAC 424 ||||||| || || || ||| || ||| || || |||| |||||||||||||||||| Sbjct 25446 CTTAACCTTGCCACGCATACG-TAAGTCGTTGGTTCCTTCTCCAAAAGGCACGCCGTCAC 25388 Query 425 CTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTAT 484 ||| | | |||||||| ||| ||||||| |||||||| |||| Sbjct 25387 ------CCTTACGG--------GCTCCGACTCTTTGAAGGCACAGAGTTTCAGGATCTAT 25342 Query 485 TTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTC 544 |||||||||| ||||| ||||| |||||||||||||||||||||| | |||||| || Sbjct 25341 TTCACTCCCCTTTCGGGGTTCTTTTAACCTTTCCCTCACGGTACTTGTGCACTATCGATC 25282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817489580800