Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27]
6,075 sequences; 67,380,660 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq1 161 2e-37
>seq1
Length=50294
Score = 161 bits (178), Expect = 2e-37
Identities = 268/372 (72%), Gaps = 24/372 (6%)
Strand=Plus/Minus
Query 45 GGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCC 104
||||||| |||||||| || || |||| ||||| || |||| ||| | ||| || |
Sbjct 25581 GGTTCGGCCCTCCAGTAGGTTGT-ACCCCACCTT-CAGCCTGGGCATGAG-TAGCTCACA 25525
Query 105 CGGTTTTCGGGTCTATTTCCCAGCGACTAGA--CGCCCTAGTAAGACTCGCTTTTCGCTA 162
||| ||||||||||| | | | |||| | ||||||| | ||||| | ||| | |||
Sbjct 25524 CGGGTTTCGGGTCTACTATAC-GTGACTGAATTCGCCCTATTCAGACTTGGTTTCC-CTA 25467
Query 163 CGCCTCCCCT-----ATTCGGTTAAGCTTTGCCACTGAAAA-TAAGTCGCTGACCCATTA 216
|| |||| | || |||| ||| ||||| | | ||||||| || | ||
Sbjct 25466 CGGCTCCGGGTGTAAACTCCCTTAACCTT-GCCACGCATACGTAAGTCGTTGGTTCCTTC 25408
Query 217 TACAAAAGGTACGCAGTCACCCA-ACAAAGTGGGCTCCCACTGCTTGTACGCATACGGTT 275
| ||||||| |||| ||||||| || ||||||| ||| ||| | ||| | |||
Sbjct 25407 TCCAAAAGGCACGCCGTCACCCTTAC-----GGGCTCCGACTCTTTGAAGGCACAGAGTT 25353
Query 276 TCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGT 335
|||||||||||||||||||||| || ||||||||||| |||||||||||||||||| ||
Sbjct 25352 TCAGGATCTATTTCACTCCCCTTTC-GGGGTTCTTTTAACCTTTCCCTCACGGTACTTGT 25294
Query 336 TCACTATCGGTCAGTCA-GTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACA 394
|||||||| || ||| || | ||||||||| || ||||| || ||||| ||
Sbjct 25293 GCACTATCGATC--TCATATACTGTTTAGCCTTAGAACGTGGTCGTCCTGAATTCACACC 25236
Query 395 AAGTTTCTCGTG 406
|||| ||||
Sbjct 25235 GGCTTTCACGTG 25224
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1241524572800
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |