Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq1 217 2e-54 >seq1 Length=50294 Score = 217 bits (240), Expect = 2e-54 Identities = 211/269 (78%), Gaps = 2/269 (1%) Strand=Plus/Minus Query 8 GGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGC 67 |||||| ||||||||| ||||| |||||| |||| ||||||||| | | || ||| Sbjct 27604 GGCTTCCCACTTAGATGCTTTCAGTGGTTATCCTTTCCGAACTTAGCTACTCGGCGGTGC 27545 Query 68 ACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGA 127 |||| | ||| | | | |||||| |||| |||||| ||||||||||||||||| | | Sbjct 27544 CATTGGTTG-ACAGCCGATCCACCAGGGGTTCGTCCATTCCGGTCCTCTCGTACTAGGAA 27486 Query 128 CAGCTCCTCTCAAATTTCCTA-CGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGT 186 ||| || |||| | || | ||| ||| | ||||||| || ||||||||| |||||| Sbjct 27485 CAGATCTCATCAAGTATCTAAACGCTCACAGCAGATAGGGGCCAAACTGTCTCACGACGT 27426 Query 187 TCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTT 246 | |||||||||||| ||| || |||||| ||||||||||| |||||||||| || || Sbjct 27425 TTTGAACCCAGCTCACGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGAGCTTCTC 27366 Query 247 CAGCCCCAGGATGAGACGAGCCGACATCG 275 || |||||||||| || |||||||||||| Sbjct 27365 CACCCCCAGGATGTGATGAGCCGACATCG 27337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780754048700