Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq1 313 7e-83 >seq1 Length=50294 Score = 313 bits (346), Expect = 7e-83 Identities = 268/326 (82%), Gaps = 5/326 (2%) Strand=Plus/Plus Query 168 ATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGG 227 || |||||||||| ||||| || |||||||| | || ||||| | |||||||| Sbjct 23196 ATCAGCTAGTTGGCGGGGTAATAGCCCACCAAGGCAATGACGGGTAGCTGGTCTGAGAGG 23255 Query 228 GTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGG 287 || | |||||| |||||||||||||||||||| |||||||||||||||||||||| || Sbjct 23256 ACGACCAGCCACAATGGAACTGAGACACGGTCCATACTCCTACGGGAGGCAGCAGTGAGG 23315 Query 288 AATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTC 347 ||| || |||||||||| ||||||||||| ||| || |||||||| |||||| ||||| Sbjct 23316 AATCTTCCACAATGGGCGAAAGCCTGATGGAGCGACACCGCGTGAAGGATGAA-GCCTTT 23374 Query 348 G--GGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCCG 405 | ||| ||||| ||| | ||| |||||||||||||||||||| ||||| ||| || Sbjct 23375 GTTGGT-GTAAACTTCTTTTCTCTAGGAAGATAATGACGGTACTAGAGGAATAAGGGGCG 23433 Query 406 GCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACT 465 || |||| |||||||||||||||||||||||| ||| | ||||||||||||||||||| Sbjct 23434 GCAAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGCCCCAAGCGTTATCCGGAATTACT 23493 Query 466 GGGGCGTAAAGGGTGCGTAGGTGGTT 491 |||||||||| || |||||||||| Sbjct 23494 -GGGCGTAAAGCGTCTGTAGGTGGTT 23518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497509020800