Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq1 269 6e-70 >seq1 Length=50294 Score = 269 bits (298), Expect = 6e-70 Identities = 306/410 (75%), Gaps = 9/410 (2%) Strand=Plus/Plus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 |||| ||||| ||| |||| |||| |||||||||||||||||||||||| ||| | Sbjct 23414 TACTAGAGGAATAAGGGGCGGCAAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGCCCC 23473 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120 ||||||||||||||||||||||||||||| || |||||||||| ||||| | || Sbjct 23474 AAGCGTTATCCGGAATTACTGGGCGTAAAGCGTCTGTAGGTGGTTCGGAAAGTCTCAAGT 23533 Query 121 GAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGG 180 |||||| | |||||||||| | ||||| |||||| | || ||||| |||| Sbjct 23534 GAAAGGTCAGGGCTCAACCCTGTACTTGCTTGGGAAACTATCGAACTTGAGTGTGGGAGA 23593 Query 181 GGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGG 240 |||||| ||| | | |||| |||| ||| ||| |||| | ||| |||| | Sbjct 23594 GGCAAGCAGAACTGTATGAGTAGGGGTGCAATCCGTTGATACATACAAGAATACCAAAAG 23653 Query 241 CGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAG 300 ||||||| |||||||||| |||||||||||| ||||||||||||||||||| | Sbjct 23654 CGAAGGCAGCTTGCTGGAACACTACTGACACTGAGAGACGAAAGCGTGGGGAGCAAAAGG 23713 Query 301 GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGG--GGCGCAT 358 |||||||||||| |||||||||||| ||||||||| || ||| |||| || || | Sbjct 23714 GATTAGATACCCCTGTAGTCCACGCCCTAAACGATGGATGCTAAGTGTTGGACTTCGGTT 23773 Query 359 AAGTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 |||||| | ||| |||||| |||| || || |||| |||||| Sbjct 23774 CAGTGCTTC-------AAGCTAACGCATTAAGCATCCCGCCTGAGGAGTA 23816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203126905600