Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq4788 273 4e-71 seq25 75.2 2e-11 >seq4788 Length=4699 Score = 273 bits (302), Expect = 4e-71 Identities = 216/258 (84%), Gaps = 1/258 (0%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||||| || | | | | || ||||||| |||||||||||||||||||| Sbjct 4164 CTTCTTAGAGGGACTTTCAGTGACTAACTGAAGGAAGTTGGAGGCAATAACAGGTCTGTG 4105 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||||||||||||||||||||||| | |||||||| || | Sbjct 4104 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATACGCTCAACGAGTATATAA 4045 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||||| || |||||||||||||||| | || | ||||||| |||||||| |||| Sbjct 4044 CCTTGATCGATAGGTCTGGGTAATCTTTTGAATACGTATCGTGCTAGGGATAGATTATTG 3985 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| |||| |||||||||| |||||||| ||| ||||||||| || |||||| Sbjct 3984 CAATTATTAATCTTGAACGAGGAATTCCTAGTAAACGCAAGTCATCAGCTTGCATTGATT 3925 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 3924 ACGTCCCTGCCCTTTGTA 3907 >seq25 Length=3065 Score = 75.2 bits (82), Expect = 2e-11 Identities = 89/121 (74%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 208 GGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAA 267 ||| || ||| | || ||||||||| ||||| | | ||| || ||| | | | || Sbjct 182 GGGCAAACTTTTCAATTACTGTCGTGCCTGGGATCGGGGTTTGTAACTATCCCCCGTGAA 123 Query 268 CGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGT 327 | |||||| |||||||||| | ||||||| | | ||| |||||||||||||||||| Sbjct 122 CCAGGAATTCCTAGTAAGCACAATTCATCAGATTGTGCTGAATACGTCCCTGCCCTTTGT 63 Query 328 A 328 | Sbjct 62 A 62 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947142457600