Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq1 280 5e-73 >seq1 Length=50294 Score = 280 bits (310), Expect = 5e-73 Identities = 362/489 (74%), Gaps = 22/489 (4%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 |||||||||| ||||| ||||||||| ||||||| |||||| | | |||| || Sbjct 27202 TCGACTTGTAGGTCTCTCAGTCAAGCAGGCTTGTGCGAATACACTATCAGTCCGATTTCC 27143 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 | || | || || ||||||| |||||||||||||||||| ||||| |||||||||||| Sbjct 27142 ATCCGGACTTAGCCTACCTTTGTGCGCCTCCGTTACATTTTAGGAGG-CAACCGCCCCAG 27084 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGT-TAGATATCCA 179 ||||||| |||| || |||| |||||| | | | | || ||| || |||| || Sbjct 27083 TTAAACTCCCCATCAAGCACGGTCCCC--CGCTGTGCGGGGTTAGAGGCATACATATACA 27026 Query 180 CTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAG 239 || ||||||| ||||| || |||| | |||||||| | |||||| | Sbjct 27025 --------AGGGTGGTATCTCAACGTCGGCTCCGATAGAACTAGCGTCCCATCATCATCG 26974 Query 240 TCTCCCACCTATCCTACACAAACC---GCACCGAATGCCAATACCAAGCTATAGTGAAGG 296 |||||||||||||| |||||| | || || | || | |||| ||| ||| ||| Sbjct 26973 CCTCCCACCTATCCTGCACAAATATATGTAC-GACT--CAGTGCCAAACTAGAGTAAAGC 26917 Query 297 TCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTC 355 | | |||||||| |||| ||| ||| | || |||| ||||| || ||||||||| Sbjct 26916 TTCATAGGGTCTTTCCGTCTTGCTGCGAGTAATCGGCATTTTTACCGATATTGCAATTTC 26857 Query 356 ACCGGGCCTGTGGTTGAGACAGCAGGGGAGTC-GTTACGCCATTCGTGCAGGTCGGAACT 414 |||||| || | ||||||||| | || | |||| ||| ||||||| |||||||||| Sbjct 26856 ACCGGGACTAAGCTTGAGACAGT-GCCCAGACCGTTATGCCGTTCGTGCGGGTCGGAACT 26798 Query 415 TACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGG 474 |||||||||||||||||||||||||||||| ||||||||||| ||| |||| || || Sbjct 26797 TACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGTCGTTCACCAGG 26738 Query 475 GCTTCAATT 483 ||| |||| Sbjct 26737 ACTT-AATT 26730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702296579200