Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq1 158 3e-36 >seq1 Length=50294 Score = 158 bits (174), Expect = 3e-36 Identities = 160/207 (77%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||||||| | | | ||||||||||||||| | ||| |||| || Sbjct 23393 AAAAGAAGTTTACAC-CAACAAAGGCTTCATCCTTCACGCGGTGTCGCTCCATCAGGCTT 23335 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| |||||| || |||||||||||||||||||||||||||| ||||||||||||||| Sbjct 23334 TCGCCCATTGTGGAAGATTCCTCACTGCTGCCTCCCGTAGGAGTATGGACCGTGTCTCAG 23275 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260 ||||| ||||| | | |||||||||| | ||| || || | | || ||||||| || Sbjct 23274 TTCCATTGTGGCTGGTCGTCCTCTCAGACCAGCTACCCGTCATTGCCTTGGTGGGCTATT 23215 Query 261 ACCCCGCCTACTACCTAATGGAACGCA 287 |||||||| |||| || || | |||| Sbjct 23214 ACCCCGCCAACTAGCTGATAGGCCGCA 23188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068735070400