Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 2e-12 >seq1 Length=50294 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/80 (85%), Gaps = 1/80 (1%) Strand=Plus/Plus Query 142790 TTCGGGGAATTAGCTCAGTTGG-TAGAGCGCCTGCTTTGCAAGCAGGATGTCAACGGTTC 142848 || |||| ||||||||||||| ||||||||||| |||||| |||||| ||||| ||||| Sbjct 30479 TTTGGGGCCTTAGCTCAGTTGGCTAGAGCGCCTGTTTTGCACGCAGGAGGTCAAGGGTTC 30538 Query 142849 GAGTCCGTTATTCTCCACCA 142868 || ||| ||| |||||||| Sbjct 30539 GACTCCCTTAGGCTCCACCA 30558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691406692317000