Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq15605 143 9e-32
seq22061 123 8e-26
seq3815 113 1e-22
seq5346 86.0 2e-14
>seq15605
Length=1084
Score = 143 bits (158), Expect = 9e-32
Identities = 88/94 (94%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 396 ATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTC 455
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct 1084 ATGCGCGTCACTAATTAGATGAAGAGGCATTTGGCTACTTTAAGAGAGTCATAGTTACTC 1025
Query 456 CCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCA 489
|| | |||||||||||||||||| || |||||||
Sbjct 1024 CCTCTGTTTACCCGCGCTTGGTTAAACTTCTTCA 991
>seq22061
Length=726
Score = 123 bits (136), Expect = 8e-26
Identities = 71/73 (97%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 325 CAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCG 384
|||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 654 CAAGCCCGTTGCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGAATCTCG 713
Query 385 TTAATCCATTCAT 397
|||||||||||||
Sbjct 714 TTAATCCATTCAT 726
Score = 75.2 bits (82), Expect = 4e-11
Identities = 83/111 (75%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| | |||||| || ||||||| || |||| | |||| | |||||||||||| |
Sbjct 18 CTTCTACTCTACGCCAGGTTTCTGTCCTGGCTGAGCTCACCTTGGAACACCTGCGTTACG 77
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCA 117
| |||||||| | ||| ||| |||||| || |||||||||||| |||
Sbjct 78 ACTCGACAGATGTACTGCCTCAGTCAAACTTTCCGCCTGACAATGTCTTCA 128
>seq3815
Length=4078
Score = 113 bits (124), Expect = 1e-22
Identities = 67/70 (96%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 420 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTG 479
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 AGGCATTTGGCTACTTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTG 60
Query 480 AATTTCTTCA 489
|| ||| |||
Sbjct 61 AACTTCCTCA 70
>seq5346
Length=3077
Score = 86.0 bits (94), Expect = 2e-14
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 22 AGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGC 81
|| ||||||| || |||| | | || | |||||||||||| | ||| |||||||| |
Sbjct 2621 AGGTTTCTGTCCTGGTTGAGCTCACTTTGGAACACCTGCGTTACGATTTGACAGATGTAC 2680
Query 82 CGCCCCAGCCAAACTCCCCACCTGACAATGTCATC 116
|||||||| ||||||| || |||||||||||| ||
Sbjct 2681 CGCCCCAGTCAAACTCTCCGCCTGACAATGTCTTC 2715
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1634707951968
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |