Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq15605 143 9e-32 seq22061 123 8e-26 seq3815 113 1e-22 seq5346 86.0 2e-14 >seq15605 Length=1084 Score = 143 bits (158), Expect = 9e-32 Identities = 88/94 (94%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 396 ATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTC 455 |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| Sbjct 1084 ATGCGCGTCACTAATTAGATGAAGAGGCATTTGGCTACTTTAAGAGAGTCATAGTTACTC 1025 Query 456 CCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCA 489 || | |||||||||||||||||| || ||||||| Sbjct 1024 CCTCTGTTTACCCGCGCTTGGTTAAACTTCTTCA 991 >seq22061 Length=726 Score = 123 bits (136), Expect = 8e-26 Identities = 71/73 (97%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 325 CAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCG 384 |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 654 CAAGCCCGTTGCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGAATCTCG 713 Query 385 TTAATCCATTCAT 397 ||||||||||||| Sbjct 714 TTAATCCATTCAT 726 Score = 75.2 bits (82), Expect = 4e-11 Identities = 83/111 (75%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| | |||||| || ||||||| || |||| | |||| | |||||||||||| | Sbjct 18 CTTCTACTCTACGCCAGGTTTCTGTCCTGGCTGAGCTCACCTTGGAACACCTGCGTTACG 77 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCA 117 | |||||||| | ||| ||| |||||| || |||||||||||| ||| Sbjct 78 ACTCGACAGATGTACTGCCTCAGTCAAACTTTCCGCCTGACAATGTCTTCA 128 >seq3815 Length=4078 Score = 113 bits (124), Expect = 1e-22 Identities = 67/70 (96%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 420 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTG 479 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 AGGCATTTGGCTACTTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTG 60 Query 480 AATTTCTTCA 489 || ||| ||| Sbjct 61 AACTTCCTCA 70 >seq5346 Length=3077 Score = 86.0 bits (94), Expect = 2e-14 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 22 AGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGC 81 || ||||||| || |||| | | || | |||||||||||| | ||| |||||||| | Sbjct 2621 AGGTTTCTGTCCTGGTTGAGCTCACTTTGGAACACCTGCGTTACGATTTGACAGATGTAC 2680 Query 82 CGCCCCAGCCAAACTCCCCACCTGACAATGTCATC 116 |||||||| ||||||| || |||||||||||| || Sbjct 2681 CGCCCCAGTCAAACTCTCCGCCTGACAATGTCTTC 2715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634707951968