Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq4589 194 1e-44 seq4951 138 9e-28 >seq4589 Length=3505 Score = 194 bits (214), Expect = 1e-44 Identities = 514/777 (66%), Gaps = 15/777 (2%) Strand=Plus/Minus Query 61045 AATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAA 61104 |||||||| | || || || | || || | ||| | || |||||| | || || Sbjct 2977 AATCCTCGAAGATTTGTCGTGATGCCAATACAATATCATGACATTTGGGAGTTCTATAAG 2918 Query 61105 AAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGAC 61164 || || | ||||| || |||||||| |||||||| ||||| | || || | | || Sbjct 2917 AAAGCTGTCGCTTCTTTTTGGACGGTTGAGGAGGTTGATTTAGCGAAGGATCTTACCGAT 2858 Query 61165 TGGGAGCGTTT-ATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGC 61223 ||||| | | | || ||||||| ||| || ||| |||| |||| |||||||| Sbjct 2857 TGGGAAAATCTCAATGAT-GGTGAACGACACTTTATTTCGTATGTTCTGGCCTTCTTTGC 2799 Query 61224 CGCTTCGGACGGTATCGTCAATGAGAATTTAT--TGGAACGTTTCGCGCAGGAGGTGCAA 61281 || || || ||||| || || |||||| | ||| ||| | || || ||| Sbjct 2798 AGCGAGTGATGGCATCGTTAACGAAAATTTAACCTTGAATTTTTGTAAC--GAAGTTCAA 2741 Query 61282 GTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAG 61341 || | ||||| |||||||| || || | || | ||| | ||||| | || || || Sbjct 2740 GTTCCTGAGGCTCGTTGTTTTTATGGAATGCAAGTGGCCGTTGAGAACATTCATTCTGAA 2681 Query 61342 ATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTC 61401 ||||| | |||| |||||||| || ||| ||| | ||| || ||||| || || Sbjct 2680 ATGTATTCTCTTCTGATCGATACATATGTCAAGGACCCGGCAGAGCGTGATTTTTTATTT 2621 Query 61402 AATGCCATCGAGACGATACCG-GCGGTG--AAGCGGAAAGCGGATTGGGCCTTCAATTGG 61458 || ||||| | ||| | || ||| | ||| || ||||||||||| | || ||| Sbjct 2620 AACGCCATTCAAACGCTGCCATGCGTCGCTAAG---AAGGCGGATTGGGCACTTAAGTGG 2564 Query 61459 ATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGT 61518 ||| | | || | ||| | | | ||| || || |||| || || | | |||||| Sbjct 2563 ATCGCGAATAAGAGGGCATCGTACGCTGAGCGTGTGGTGGCTTTCGCTGCTATTGAGGGT 2504 Query 61519 GTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCC 61578 || || ||| || |||||||| | || |||||| | ||||| ||||| || ||||| Sbjct 2503 GTTTTCTTCTCCGGTTCGTTTGCTTCTATTTTTTGGCTCAAGAAGCGTGGTCTCATGCCT 2444 Query 61579 GGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCT 61638 ||||| |||||||| || ||| |||| ||||| || ||| | || || ||||| Sbjct 2443 GGTCTTACCTTCAGTAACGAGCTGATCAGTCGCGATGAAGGCCTTCACACCGACTTTGCG 2384 Query 61639 GTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATT 61698 | | | ||||| | | | || ||| || | | || | ||| ||| ||| Sbjct 2383 TGTCTAATTTTCAAGC---ACATTGTCAATAAACCTACAGCAGAAAGAGTGTATGACATT 2327 Query 61699 GTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTC 61758 | ||||| || | || ||| ||||| || || || || || || ||| || Sbjct 2326 ATGACGGAGGCCGTCAGCATAGAATGTGAATTCCTCACAGATGCCTTACCTGTCGATCTT 2267 Query 61759 ATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTG 61815 ||||||||||||||| | ||||||| ||||| || |||||||| || || ||| Sbjct 2266 ATCGGCATGAATTGTCGCCTAATGTGTCAGTACATAAGGTTTGTTGCTGATCGGCTG 2210 >seq4951 Length=3275 Score = 138 bits (152), Expect = 9e-28 Identities = 251/359 (70%), Gaps = 10/359 (3%) Strand=Plus/Plus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 ||| || ||||| || ||||| || ||| ||| ||||| | ||| || ||||||| Sbjct 1781 CATGAACAGATCGGGGATCCAAAGCGCGAGGAAAAGATCTCTTGCACGAATCTCCTCAGC 1840 Query 66400 GCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGT 66458 ||| ||| || || ||||| || | || | | | || | ||||||||| || |||| Sbjct 1841 GCCAGTG-TTCTTCCGCAATTCCACAAATTGCAGTACATCTGGATGCCATGGCTCAAGGT 1899 Query 66459 AGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGT 66518 ||| ||||| | ||| |||||| ||||||||||| || || ||||| ||| Sbjct 1900 AGACAGCGAAGGCGCCAGGTCGTTTGTTCCCACCTTGGTCTACATAACGAGCAGTGCTGT 1959 Query 66519 TGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGG 66578 ||||||| |||| ||||||||| || || || || | |||||||||||| ||||| | Sbjct 1960 TGAAGACTCGCAGCATCGGTACAAGACCATTCGACTCCCCATTGGTGCCGGCGATGAACG 2019 Query 66579 ATCCTCGTGC-CCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGAT- 66636 | | | | | ||| ||| |||||||| ||||| || ||||| || | || ||||| Sbjct 2020 -TGCCCTTACTCCGAATACAATGAACATTGAGACCGATCCCACCCGCACTTTTGGAGATA 2078 Query 66637 --GGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGT 66693 |||| ||| | | |||| | ||||||| ||||| |||| |||| || || Sbjct 2079 AGGGCA-CACTGTTTGAGCGTGTC--GTATATGCCCTCAATACTGTCATCCTTCATCGT 2134 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 65992 CACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGT 66051 |||||| ||||| |||| || ||| || | ||||| ||||| |||| ||| | | Sbjct 1363 CACAAAGTTGGGGAGGGAAATAGAAGCCAAATTGCACACAGCAGTCTCCGTAGGCGAACT 1422 Query 66052 ATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATT 66111 ||||||||||| |||||||| ||||| ||| ||| || || | || || ||||| Sbjct 1423 GTACTCGACAATCTCGGTGCAAAGATTTGAGCACTTTATAGTCCCTAGATGTTGATGATT 1482 Query 66112 ACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGA 66171 ||| || || || | |||||| || | ||| | ||| |||| || || | || Sbjct 1483 GGACTTCCGGTTACAAGAATCCTTATAAAGCATAAAGGGATTGCCTGTTTCGATCTGATT 1542 Query 66172 CTCAATGATGG 66182 ||||||||||| Sbjct 1543 CTCAATGATGG 1553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397422198272240