Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq4589 194 1e-44
seq4951 138 9e-28
>seq4589
Length=3505
Score = 194 bits (214), Expect = 1e-44
Identities = 514/777 (66%), Gaps = 15/777 (2%)
Strand=Plus/Minus
Query 61045 AATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAA 61104
|||||||| | || || || | || || | ||| | || |||||| | || ||
Sbjct 2977 AATCCTCGAAGATTTGTCGTGATGCCAATACAATATCATGACATTTGGGAGTTCTATAAG 2918
Query 61105 AAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGAC 61164
|| || | ||||| || |||||||| |||||||| ||||| | || || | | ||
Sbjct 2917 AAAGCTGTCGCTTCTTTTTGGACGGTTGAGGAGGTTGATTTAGCGAAGGATCTTACCGAT 2858
Query 61165 TGGGAGCGTTT-ATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGC 61223
||||| | | | || ||||||| ||| || ||| |||| |||| ||||||||
Sbjct 2857 TGGGAAAATCTCAATGAT-GGTGAACGACACTTTATTTCGTATGTTCTGGCCTTCTTTGC 2799
Query 61224 CGCTTCGGACGGTATCGTCAATGAGAATTTAT--TGGAACGTTTCGCGCAGGAGGTGCAA 61281
|| || || ||||| || || |||||| | ||| ||| | || || |||
Sbjct 2798 AGCGAGTGATGGCATCGTTAACGAAAATTTAACCTTGAATTTTTGTAAC--GAAGTTCAA 2741
Query 61282 GTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAG 61341
|| | ||||| |||||||| || || | || | ||| | ||||| | || || ||
Sbjct 2740 GTTCCTGAGGCTCGTTGTTTTTATGGAATGCAAGTGGCCGTTGAGAACATTCATTCTGAA 2681
Query 61342 ATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTC 61401
||||| | |||| |||||||| || ||| ||| | ||| || ||||| || ||
Sbjct 2680 ATGTATTCTCTTCTGATCGATACATATGTCAAGGACCCGGCAGAGCGTGATTTTTTATTT 2621
Query 61402 AATGCCATCGAGACGATACCG-GCGGTG--AAGCGGAAAGCGGATTGGGCCTTCAATTGG 61458
|| ||||| | ||| | || ||| | ||| || ||||||||||| | || |||
Sbjct 2620 AACGCCATTCAAACGCTGCCATGCGTCGCTAAG---AAGGCGGATTGGGCACTTAAGTGG 2564
Query 61459 ATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGT 61518
||| | | || | ||| | | | ||| || || |||| || || | | ||||||
Sbjct 2563 ATCGCGAATAAGAGGGCATCGTACGCTGAGCGTGTGGTGGCTTTCGCTGCTATTGAGGGT 2504
Query 61519 GTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCC 61578
|| || ||| || |||||||| | || |||||| | ||||| ||||| || |||||
Sbjct 2503 GTTTTCTTCTCCGGTTCGTTTGCTTCTATTTTTTGGCTCAAGAAGCGTGGTCTCATGCCT 2444
Query 61579 GGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCT 61638
||||| |||||||| || ||| |||| ||||| || ||| | || || |||||
Sbjct 2443 GGTCTTACCTTCAGTAACGAGCTGATCAGTCGCGATGAAGGCCTTCACACCGACTTTGCG 2384
Query 61639 GTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATT 61698
| | | ||||| | | | || ||| || | | || | ||| ||| |||
Sbjct 2383 TGTCTAATTTTCAAGC---ACATTGTCAATAAACCTACAGCAGAAAGAGTGTATGACATT 2327
Query 61699 GTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTC 61758
| ||||| || | || ||| ||||| || || || || || || ||| ||
Sbjct 2326 ATGACGGAGGCCGTCAGCATAGAATGTGAATTCCTCACAGATGCCTTACCTGTCGATCTT 2267
Query 61759 ATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTG 61815
||||||||||||||| | ||||||| ||||| || |||||||| || || |||
Sbjct 2266 ATCGGCATGAATTGTCGCCTAATGTGTCAGTACATAAGGTTTGTTGCTGATCGGCTG 2210
>seq4951
Length=3275
Score = 138 bits (152), Expect = 9e-28
Identities = 251/359 (70%), Gaps = 10/359 (3%)
Strand=Plus/Plus
Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399
||| || ||||| || ||||| || ||| ||| ||||| | ||| || |||||||
Sbjct 1781 CATGAACAGATCGGGGATCCAAAGCGCGAGGAAAAGATCTCTTGCACGAATCTCCTCAGC 1840
Query 66400 GCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGT 66458
||| ||| || || ||||| || | || | | | || | ||||||||| || ||||
Sbjct 1841 GCCAGTG-TTCTTCCGCAATTCCACAAATTGCAGTACATCTGGATGCCATGGCTCAAGGT 1899
Query 66459 AGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGT 66518
||| ||||| | ||| |||||| ||||||||||| || || ||||| |||
Sbjct 1900 AGACAGCGAAGGCGCCAGGTCGTTTGTTCCCACCTTGGTCTACATAACGAGCAGTGCTGT 1959
Query 66519 TGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGG 66578
||||||| |||| ||||||||| || || || || | |||||||||||| ||||| |
Sbjct 1960 TGAAGACTCGCAGCATCGGTACAAGACCATTCGACTCCCCATTGGTGCCGGCGATGAACG 2019
Query 66579 ATCCTCGTGC-CCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGAT- 66636
| | | | | ||| ||| |||||||| ||||| || ||||| || | || |||||
Sbjct 2020 -TGCCCTTACTCCGAATACAATGAACATTGAGACCGATCCCACCCGCACTTTTGGAGATA 2078
Query 66637 --GGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGT 66693
|||| ||| | | |||| | ||||||| ||||| |||| |||| || ||
Sbjct 2079 AGGGCA-CACTGTTTGAGCGTGTC--GTATATGCCCTCAATACTGTCATCCTTCATCGT 2134
Score = 87.8 bits (96), Expect = 1e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 65992 CACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGT 66051
|||||| ||||| |||| || ||| || | ||||| ||||| |||| ||| | |
Sbjct 1363 CACAAAGTTGGGGAGGGAAATAGAAGCCAAATTGCACACAGCAGTCTCCGTAGGCGAACT 1422
Query 66052 ATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATT 66111
||||||||||| |||||||| ||||| ||| ||| || || | || || |||||
Sbjct 1423 GTACTCGACAATCTCGGTGCAAAGATTTGAGCACTTTATAGTCCCTAGATGTTGATGATT 1482
Query 66112 ACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGA 66171
||| || || || | |||||| || | ||| | ||| |||| || || | ||
Sbjct 1483 GGACTTCCGGTTACAAGAATCCTTATAAAGCATAAAGGGATTGCCTGTTTCGATCTGATT 1542
Query 66172 CTCAATGATGG 66182
|||||||||||
Sbjct 1543 CTCAATGATGG 1553
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397422198272240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |