Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenolepis_20diminuta_20[genbank_20GCA_5F000951255.1_202014-09-25] 13,910 sequences; 165,878,914 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1500 102 1e-19 >seq1500 Length=31814 Score = 102 bits (112), Expect = 1e-19 Identities = 95/118 (81%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| ||||| |||||| |||| ||||||||| |||| ||| ||| ||| ||||||| Sbjct 14252 CTAATTAGCGGGTTAAAGTCTTGTTCGTTATTGGAAGTAATAAGATAAACTGTTCCACCA 14193 Query 202 ACTAAGAACGGCCATGCACC-ACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 | ||||||| | |||||||| || |||| | ||||||||||||||||||| || ||| Sbjct 14192 ATTAAGAACTGACATGCACCGACAACCCCCA-AATCAAGAAAGAGCTATCAGTCGGTC 14136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796692628710