Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenolepis_20diminuta_20[genbank_20GCA_5F000951255.1_202014-09-25] 13,910 sequences; 165,878,914 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq12575 104 8e-20 >seq12575 Length=618 Score = 104 bits (114), Expect = 8e-20 Identities = 95/120 (79%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 269 CACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAG 328 ||| | ||||| ||| | |||| ||||||| ||| |||||| | ||||| | |||||| Sbjct 120 CACTATGTCGGCCTAAATTCAAAATCAACAGAGTCCTCTTTCTTCACTGATACTGCCAAG 61 Query 329 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAA 388 | | |||||||||||||||||| ||| |||||||||| ||||| |||||| ||||| Sbjct 60 CTTGCTCCCTTGGCTGTGGTTTCCGTAGGTAGTAGATAGAAACAGTATGAATCTAGTTAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634972543680