Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenolepis_20microstoma_20[genbank_20GCA_5F000469805.2_202015-12-
11] 3,643 sequences; 182,136,974 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq3269 100 1e-19
seq2487 100 1e-19
seq996 100 1e-19
seq855 100 1e-19
seq851 100 1e-19
seq142 100 1e-19
>seq3269
Length=1147
Score = 100 bits (110), Expect = 1e-19
Identities = 63/68 (93%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct 391 GGAAAAGAAACTAACCAGGATTCCCTTGGTAACGGCGAGTGAAGAGGGAAGAGCCCAGCA 332
Query 61 CCGAATCC 68
||||| ||
Sbjct 331 CCGAAGCC 324
>seq2487
Length=2226
Score = 100 bits (110), Expect = 1e-19
Identities = 63/68 (93%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct 399 GGAAAAGAAACTAACCAGGATTCCCTTGGTAACGGCGAGTGAAGAGGGAAGAGCCCAGCA 340
Query 61 CCGAATCC 68
||||| ||
Sbjct 339 CCGAAGCC 332
>seq996
Length=24352
Score = 100 bits (110), Expect = 1e-19
Identities = 63/68 (93%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct 3095 GGAAAAGAAACTAACCAGGATTCCCTTGGTAACGGCGAGTGAAGAGGGAAGAGCCCAGCA 3036
Query 61 CCGAATCC 68
||||| ||
Sbjct 3035 CCGAAGCC 3028
>seq855
Length=34863
Score = 100 bits (110), Expect = 1e-19
Identities = 63/68 (93%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct 19258 GGAAAAGAAACTAACCAGGATTCCCTTGGTAACGGCGAGTGAAGAGGGAAGAGCCCAGCA 19317
Query 61 CCGAATCC 68
||||| ||
Sbjct 19318 CCGAAGCC 19325
>seq851
Length=36587
Score = 100 bits (110), Expect = 1e-19
Identities = 63/68 (93%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct 5359 GGAAAAGAAACTAACCAGGATTCCCTTGGTAACGGCGAGTGAAGAGGGAAGAGCCCAGCA 5300
Query 61 CCGAATCC 68
||||| ||
Sbjct 5299 CCGAAGCC 5292
>seq142
Length=94272
Score = 100 bits (110), Expect = 1e-19
Identities = 63/68 (93%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct 91326 GGAAAAGAAACTAACCAGGATTCCCTTGGTAACGGCGAGTGAAGAGGGAAGAGCCCAGCA 91267
Query 61 CCGAATCC 68
||||| ||
Sbjct 91266 CCGAAGCC 91259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230392131120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |