Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenolepis_20microstoma_20[genbank_20GCA_5F000469805.2_202015-12- 11] 3,643 sequences; 182,136,974 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq3269 100 1e-19 seq2487 100 1e-19 seq996 100 1e-19 seq855 100 1e-19 seq851 100 1e-19 seq142 100 1e-19 >seq3269 Length=1147 Score = 100 bits (110), Expect = 1e-19 Identities = 63/68 (93%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct 391 GGAAAAGAAACTAACCAGGATTCCCTTGGTAACGGCGAGTGAAGAGGGAAGAGCCCAGCA 332 Query 61 CCGAATCC 68 ||||| || Sbjct 331 CCGAAGCC 324 >seq2487 Length=2226 Score = 100 bits (110), Expect = 1e-19 Identities = 63/68 (93%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct 399 GGAAAAGAAACTAACCAGGATTCCCTTGGTAACGGCGAGTGAAGAGGGAAGAGCCCAGCA 340 Query 61 CCGAATCC 68 ||||| || Sbjct 339 CCGAAGCC 332 >seq996 Length=24352 Score = 100 bits (110), Expect = 1e-19 Identities = 63/68 (93%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct 3095 GGAAAAGAAACTAACCAGGATTCCCTTGGTAACGGCGAGTGAAGAGGGAAGAGCCCAGCA 3036 Query 61 CCGAATCC 68 ||||| || Sbjct 3035 CCGAAGCC 3028 >seq855 Length=34863 Score = 100 bits (110), Expect = 1e-19 Identities = 63/68 (93%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct 19258 GGAAAAGAAACTAACCAGGATTCCCTTGGTAACGGCGAGTGAAGAGGGAAGAGCCCAGCA 19317 Query 61 CCGAATCC 68 ||||| || Sbjct 19318 CCGAAGCC 19325 >seq851 Length=36587 Score = 100 bits (110), Expect = 1e-19 Identities = 63/68 (93%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct 5359 GGAAAAGAAACTAACCAGGATTCCCTTGGTAACGGCGAGTGAAGAGGGAAGAGCCCAGCA 5300 Query 61 CCGAATCC 68 ||||| || Sbjct 5299 CCGAAGCC 5292 >seq142 Length=94272 Score = 100 bits (110), Expect = 1e-19 Identities = 63/68 (93%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct 91326 GGAAAAGAAACTAACCAGGATTCCCTTGGTAACGGCGAGTGAAGAGGGAAGAGCCCAGCA 91267 Query 61 CCGAATCC 68 ||||| || Sbjct 91266 CCGAAGCC 91259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230392131120