Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenolepis_20microstoma_20[genbank_20GCA_5F000469805.2_202015-12-
11] 3,643 sequences; 182,136,974 total letters
Query= AAMG01001083.1
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
seq2617 73.4 8e-11
seq996 73.4 8e-11
seq851 73.4 8e-11
>seq2617
Length=1972
Score = 73.4 bits (80), Expect = 8e-11
Identities = 86/115 (75%), Gaps = 1/115 (1%)
Strand=Plus/Plus
Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGT-CGCCTCCCAAAGAGTAACGGAGGCG 171
|||| |||||| |||| ||||||||||||||||| | || |||| |||||| ||| |
Sbjct 1644 GACATTGTCAGGCGGGGAGTTTGACTGGGGCGGTACATCTGTCAAATCGTAACGCAGGTG 1703
Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAG 226
|| ||| | |||||| ||| |||||| ||| | ||| || ||||||||
Sbjct 1704 TCCCAAGGTGAGCTCAGCCAGGACAGAAACCTGGCGTAGAGTAAAAGGGCAAAAG 1758
>seq996
Length=24352
Score = 73.4 bits (80), Expect = 8e-11
Identities = 86/115 (75%), Gaps = 1/115 (1%)
Strand=Plus/Minus
Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGT-CGCCTCCCAAAGAGTAACGGAGGCG 171
|||| |||||| |||| ||||||||||||||||| | || |||| |||||| ||| |
Sbjct 441 GACATTGTCAGGCGGGGAGTTTGACTGGGGCGGTACATCTGTCAAATCGTAACGCAGGTG 382
Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAG 226
|| ||| | |||||| ||| |||||| ||| | ||| || ||||||||
Sbjct 381 TCCCAAGGTGAGCTCAGCCAGGACAGAAACCTGGCGTAGAGTAAAAGGGCAAAAG 327
>seq851
Length=36587
Score = 73.4 bits (80), Expect = 8e-11
Identities = 86/115 (75%), Gaps = 1/115 (1%)
Strand=Plus/Minus
Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGT-CGCCTCCCAAAGAGTAACGGAGGCG 171
|||| |||||| |||| ||||||||||||||||| | || |||| |||||| ||| |
Sbjct 1636 GACATTGTCAGGCGGGGAGTTTGACTGGGGCGGTACATCTGTCAAATCGTAACGCAGGTG 1577
Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAG 226
|| ||| | |||||| ||| |||||| ||| | ||| || ||||||||
Sbjct 1576 TCCCAAGGTGAGCTCAGCCAGGACAGAAACCTGGCGTAGAGTAAAAGGGCAAAAG 1522
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 982364211168
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |