Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenolepis_20microstoma_20[genbank_20GCA_5F000469805.2_202015-12-
11] 3,643 sequences; 182,136,974 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq996 75.2 1e-11
seq330 75.2 1e-11
seq142 75.2 1e-11
>seq996
Length=24352
Score = 75.2 bits (82), Expect = 1e-11
Identities = 80/104 (77%), Gaps = 4/104 (4%)
Strand=Plus/Plus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGG-- 67
|||||||| |||||| || | ||||||||| |||||||||||| || | ||| ||
Sbjct 5295 AAACCAACGAAATAGAACCGAA-GTCCTATTCCATTATTCCATGCAAAACTTTTCAGGCA 5353
Query 68 -CGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110
||| ||||| ||||| ||||| ||||| |||| ||||| ||
Sbjct 5354 ACGTCGGCCTGATTTGAGCACTCAAATTTGTTCAAAGTAAACGT 5397
>seq330
Length=705
Score = 75.2 bits (82), Expect = 1e-11
Identities = 80/104 (77%), Gaps = 4/104 (4%)
Strand=Plus/Plus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGG-- 67
|||||||| |||||| || | ||||||||| |||||||||||| || | ||| ||
Sbjct 196 AAACCAACGAAATAGAACCGAA-GTCCTATTCCATTATTCCATGCAAAACTTTTCAGGCA 254
Query 68 -CGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110
||| ||||| ||||| ||||| ||||| |||| ||||| ||
Sbjct 255 ACGTCGGCCTGATTTGAGCACTCAAATTTGTTCAAAGTAAACGT 298
>seq142
Length=94272
Score = 75.2 bits (82), Expect = 1e-11
Identities = 80/104 (77%), Gaps = 4/104 (4%)
Strand=Plus/Plus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGG-- 67
|||||||| |||||| || | ||||||||| |||||||||||| || | ||| ||
Sbjct 93756 AAACCAACGAAATAGAACCGAA-GTCCTATTCCATTATTCCATGCAAAACTTTTCAGGCA 93814
Query 68 -CGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110
||| ||||| ||||| ||||| ||||| |||| ||||| ||
Sbjct 93815 ACGTCGGCCTGATTTGAGCACTCAAATTTGTTCAAAGTAAACGT 93858
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595178994462
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |