Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenolepis_20microstoma_20[genbank_20GCA_5F000469805.2_202015-12-
11] 3,643 sequences; 182,136,974 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq996 98.7 1e-18
seq330 98.7 1e-18
seq142 98.7 1e-18
>seq996
Length=24352
Score = 98.7 bits (108), Expect = 1e-18
Identities = 131/179 (73%), Gaps = 5/179 (3%)
Strand=Plus/Minus
Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---CTTTGCTCGAATACATTAC 66
|| ||||||||||| ||||| ||| | ||||| ||||| | |||| ||| | ||
Sbjct 5397 ACGTTTACTTTGAACAAATTTGAGTGCTCAAATCAGGCCGACGTTGCCTGAAAAGTTTTG 5338
Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAA 126
||||||||||| ||||||||| | ||||||||||| || ||||| | ||| | ||||
Sbjct 5337 CATGGAATAATGGAATAGGAC-TTCGGTTCTATTTCGTTGGTTT-TCGGATCCGAAGTAA 5280
Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
|||| || | || || ||||| || |||| || | ||||||||||| ||||
Sbjct 5279 TGATCAAAAGAGACAGGCGGGGACGTTTGTATGGCTGCGTTAGAGGTGAAATTCATGGA 5221
>seq330
Length=705
Score = 98.7 bits (108), Expect = 1e-18
Identities = 131/179 (73%), Gaps = 5/179 (3%)
Strand=Plus/Minus
Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---CTTTGCTCGAATACATTAC 66
|| ||||||||||| ||||| ||| | ||||| ||||| | |||| ||| | ||
Sbjct 298 ACGTTTACTTTGAACAAATTTGAGTGCTCAAATCAGGCCGACGTTGCCTGAAAAGTTTTG 239
Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAA 126
||||||||||| ||||||||| | ||||||||||| || ||||| | ||| | ||||
Sbjct 238 CATGGAATAATGGAATAGGAC-TTCGGTTCTATTTCGTTGGTTT-TCGGATCCGAAGTAA 181
Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
|||| || | || || ||||| || |||| || | ||||||||||| ||||
Sbjct 180 TGATCAAAAGAGACAGGCGGGGACGTTTGTATGGCTGCGTTAGAGGTGAAATTCATGGA 122
>seq142
Length=94272
Score = 98.7 bits (108), Expect = 1e-18
Identities = 131/179 (73%), Gaps = 5/179 (3%)
Strand=Plus/Minus
Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---CTTTGCTCGAATACATTAC 66
|| ||||||||||| ||||| ||| | ||||| ||||| | |||| ||| | ||
Sbjct 93858 ACGTTTACTTTGAACAAATTTGAGTGCTCAAATCAGGCCGACGTTGCCTGAAAAGTTTTG 93799
Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAA 126
||||||||||| ||||||||| | ||||||||||| || ||||| | ||| | ||||
Sbjct 93798 CATGGAATAATGGAATAGGAC-TTCGGTTCTATTTCGTTGGTTT-TCGGATCCGAAGTAA 93741
Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
|||| || | || || ||||| || |||| || | ||||||||||| ||||
Sbjct 93740 TGATCAAAAGAGACAGGCGGGGACGTTTGTATGGCTGCGTTAGAGGTGAAATTCATGGA 93682
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511981930720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |