Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenolepis_20nana_20[genbank_20GCA_5F000951275.1_202014-09-25] 16,212 sequences; 162,943,536 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq10293 75.2 1e-11 seq7720 75.2 1e-11 >seq10293 Length=3591 Score = 75.2 bits (82), Expect = 1e-11 Identities = 80/104 (77%), Gaps = 4/104 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||| |||||| || | ||||||||| |||||||||||| || | ||| |||| Sbjct 2233 AAACCAACGAAATAGAACCGAA-GTCCTATTCCATTATTCCATGCAAAACTTTTCAGGCG 2175 Query 70 ---TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | ||||| ||||| ||||| ||||| |||| ||||| || Sbjct 2174 ACATCGGCCTGATTTGAGCACTCAAATTTGTTCAAAGTAAACGT 2131 >seq7720 Length=6042 Score = 75.2 bits (82), Expect = 1e-11 Identities = 80/104 (77%), Gaps = 4/104 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||| |||||| || | ||||||||| |||||||||||| || | ||| |||| Sbjct 186 AAACCAACGAAATAGAACCGAA-GTCCTATTCCATTATTCCATGCAAAACTTTTCAGGCG 128 Query 70 ---TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | ||||| ||||| ||||| ||||| |||| ||||| || Sbjct 127 ACATCGGCCTGATTTGAGCACTCAAATTTGTTCAAAGTAAACGT 84 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595106521608