Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrostomum_20lignano_20[genbank_20GCA_5F001188465.1_202015-07-29] 49,174 sequences; 1,040,124,789 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq47519 77.0 8e-12 seq47591 75.2 3e-11 seq46907 75.2 3e-11 seq48934 73.4 1e-10 seq48897 73.4 1e-10 seq48293 73.4 1e-10 seq47617 73.4 1e-10 seq47527 73.4 1e-10 seq47380 73.4 1e-10 seq20085 73.4 1e-10 >seq47519 Length=14757 Score = 77.0 bits (84), Expect = 8e-12 Identities = 81/103 (79%), Gaps = 4/103 (4%) Strand=Plus/Minus Query 271 CGGTTTCAGGAT-CTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 |||||||| | | ||||| |||| | ||| | ||||||||| |||||||||||||| Sbjct 13350 CGGTTTCACGTTACTATTGAACTCTC-TCTTCAAAGTTCTTTTCAACTTTCCCTCACGGT 13292 Query 330 ACTAGTTCACTATCGG--TCAGTCAGTAGTATTTAGCCTTGGA 370 ||| || | ||||||| || ||| |||||||||||||||| Sbjct 13291 ACTTGTCCGCTATCGGACTCGTGCAGCAGTATTTAGCCTTGGA 13249 >seq47591 Length=7608 Score = 75.2 bits (82), Expect = 3e-11 Identities = 82/105 (78%), Gaps = 7/105 (7%) Strand=Plus/Minus Query 269 TACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGG 328 |||||||||| | ||||| |||| | ||| | ||||||||| ||||||||||||| Sbjct 5966 TACGGTTTCACGTACTATTGAACTCTC-TCTTCAAAGTTCTTTTCAACTTTCCCTCACGG 5908 Query 329 TACTAGTTCACTATCGGTCAGTCAGT---AGTATTTAGCCTTGGA 370 |||| || | ||||||| | || || |||||||||||||||| Sbjct 5907 TACTTGTCCGCTATCGGAC--TC-GTGCCAGTATTTAGCCTTGGA 5866 >seq46907 Length=19574 Score = 75.2 bits (82), Expect = 3e-11 Identities = 78/100 (78%), Gaps = 2/100 (2%) Strand=Plus/Minus Query 271 CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTA 330 |||||||| | ||||| |||| | ||| | ||||||||| ||||||||||||||| Sbjct 18715 CGGTTTCACGTACTATTGAACTCTC-TCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTA 18657 Query 331 CTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 || || | ||||||| | || |||||||||||||||| Sbjct 18656 CTTGTCCGCTATCGGACTGT-GCCAGTATTTAGCCTTGGA 18618 >seq48934 Length=38946 Score = 73.4 bits (80), Expect = 1e-10 Identities = 81/104 (78%), Gaps = 7/104 (7%) Strand=Plus/Plus Query 271 CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTA 330 |||||||| | ||||| |||| | ||| | ||||||||| ||||||||||||||| Sbjct 14288 CGGTTTCACGTACTATTGAACTCTC-TCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTA 14346 Query 331 CTAGTTCACTATCGGTCAGTCAGT---AGTATTTAGCCTTGGAG 371 || || | ||||||| | || || ||||||||||||||||| Sbjct 14347 CTTGTCCGCTATCGG--ACTC-GTGCCAGTATTTAGCCTTGGAG 14387 >seq48897 Length=13051 Score = 73.4 bits (80), Expect = 1e-10 Identities = 81/104 (78%), Gaps = 7/104 (7%) Strand=Plus/Minus Query 271 CGGTTTCAGGATCTATTTCACTCCC-CTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 |||||||| | ||||| |||| | |||| | ||||||||| |||||||||||||| Sbjct 4419 CGGTTTCACGTACTATTGAACTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGT 4360 Query 330 ACTAGTTCACTATCGGTCAGTCAGT---AGTATTTAGCCTTGGA 370 ||| || | ||||||| | || || |||||||||||||||| Sbjct 4359 ACTTGTCCGCTATCGGAC--TC-GTGCCAGTATTTAGCCTTGGA 4319 >seq48293 Length=10882 Score = 73.4 bits (80), Expect = 1e-10 Identities = 81/104 (78%), Gaps = 7/104 (7%) Strand=Plus/Minus Query 271 CGGTTTCAGGATCTATTTCACTCCC-CTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 |||||||| | ||||| |||| | |||| | ||||||||| |||||||||||||| Sbjct 5815 CGGTTTCACGTACTATTGAACTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGT 5756 Query 330 ACTAGTTCACTATCGGTCAGTCAGT---AGTATTTAGCCTTGGA 370 ||| || | ||||||| | || || |||||||||||||||| Sbjct 5755 ACTTGTCCGCTATCGGAC--TC-GTGCCAGTATTTAGCCTTGGA 5715 >seq47617 Length=19935 Score = 73.4 bits (80), Expect = 1e-10 Identities = 81/104 (78%), Gaps = 7/104 (7%) Strand=Plus/Minus Query 271 CGGTTTCAGGATCTATTTCACTCCC-CTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 |||||||| | ||||| |||| | |||| | ||||||||| |||||||||||||| Sbjct 372 CGGTTTCACGTACTATTGAACTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGT 313 Query 330 ACTAGTTCACTATCGGTCAGTCAGT---AGTATTTAGCCTTGGA 370 ||| || | ||||||| | || || |||||||||||||||| Sbjct 312 ACTTGTCCGCTATCGGAC--TC-GTGCCAGTATTTAGCCTTGGA 272 >seq47527 Length=12716 Score = 73.4 bits (80), Expect = 1e-10 Identities = 81/104 (78%), Gaps = 7/104 (7%) Strand=Plus/Minus Query 271 CGGTTTCAGGATCTATTTCACTCCC-CTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 |||||||| | ||||| |||| | |||| | ||||||||| |||||||||||||| Sbjct 3346 CGGTTTCACGTACTATTGAACTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGT 3287 Query 330 ACTAGTTCACTATCGGTCAGTCAGT---AGTATTTAGCCTTGGA 370 ||| || | ||||||| | || || |||||||||||||||| Sbjct 3286 ACTTGTCCGCTATCGGAC--TC-GTGCCAGTATTTAGCCTTGGA 3246 >seq47380 Length=13864 Score = 73.4 bits (80), Expect = 1e-10 Identities = 81/104 (78%), Gaps = 7/104 (7%) Strand=Plus/Plus Query 271 CGGTTTCAGGATCTATTTCACTCCC-CTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 |||||||| | ||||| |||| | |||| | ||||||||| |||||||||||||| Sbjct 3947 CGGTTTCACGTACTATTGAACTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGT 4006 Query 330 ACTAGTTCACTATCGGTCAGTCAGT---AGTATTTAGCCTTGGA 370 ||| || | ||||||| | || || |||||||||||||||| Sbjct 4007 ACTTGTCCGCTATCGG--ACTC-GTGCCAGTATTTAGCCTTGGA 4047 >seq20085 Length=5179 Score = 73.4 bits (80), Expect = 1e-10 Identities = 80/103 (78%), Gaps = 5/103 (5%) Strand=Plus/Plus Query 271 CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTA 330 |||||||| | ||||| |||| | ||| | ||||||||| ||||||||||||||| Sbjct 567 CGGTTTCACGTACTATTGAACTCTC-TCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTA 625 Query 331 CTAGTTCACTATCGGTCAGTCAGT---AGTATTTAGCCTTGGA 370 || || | ||||||| | || || |||||||||||||||| Sbjct 626 CTTGTCCGCTATCGGACTCTC-GTGCCAGTATTTAGCCTTGGA 667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1240989455616