Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrostomum_20lignano_20[genbank_20GCA_5F001188465.1_202015-07-29] 49,174 sequences; 1,040,124,789 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq46546 122 4e-22 seq46545 122 4e-22 seq5127 122 4e-22 seq4945 122 4e-22 seq16107 96.9 1e-14 seq13265 91.5 6e-13 seq5441 91.5 6e-13 >seq46546 Length=86527 Score = 122 bits (134), Expect = 4e-22 Identities = 112/142 (79%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 349074 CGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGG 349133 ||| || |||||| || || | ||||| |||||| || ||||||||||||| ||||||| Sbjct 14595 CGTTGATAATCTCTTTAAGCCGGGGCACGCCCAGCGTGACGTTCTTGGCCGACACGCCGG 14654 Query 349134 CAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGA 349193 || ||||||| || | ||| |||| ||||||| |||||||||| |||| | |||| Sbjct 14655 CATAGTGGAAAGTGTTGAGCGTCATCTGCGTGGCCGGCTCGCCGAGAGACTGCGCAGCGA 14714 Query 349194 GGATGCCTACCATCTCGCCGGG 349215 || ||| ||||||||||| || Sbjct 14715 GGGCGCCGACCATCTCGCCAGG 14736 >seq46545 Length=158118 Score = 122 bits (134), Expect = 4e-22 Identities = 112/142 (79%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 349074 CGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGG 349133 ||| || |||||| || || | ||||| |||||| || ||||||||||||| ||||||| Sbjct 157478 CGTTGATAATCTCTTTAAGCCGGGGCACGCCCAGCGTGACGTTCTTGGCCGACACGCCGG 157537 Query 349134 CAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGA 349193 || ||||||| || | ||| |||| ||||||| |||||||||| |||| | |||| Sbjct 157538 CATAGTGGAAAGTGTTGAGCGTCATCTGCGTGGCCGGCTCGCCGAGAGACTGCGCAGCGA 157597 Query 349194 GGATGCCTACCATCTCGCCGGG 349215 || ||| ||||||||||| || Sbjct 157598 GGGCGCCGACCATCTCGCCAGG 157619 >seq5127 Length=83736 Score = 122 bits (134), Expect = 4e-22 Identities = 112/142 (79%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 349074 CGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGG 349133 ||| || |||||| || || | ||||| |||||| || ||||||||||||| ||||||| Sbjct 68338 CGTTGATAATCTCTTTAAGCCGGGGCACGCCCAGCGTGACGTTCTTGGCCGACACGCCGG 68279 Query 349134 CAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGA 349193 || ||||||| || | ||| |||| ||||||| |||||||||| |||| | |||| Sbjct 68278 CATAGTGGAAAGTGTTGAGCGTCATCTGCGTGGCCGGCTCGCCGAGAGACTGCGCAGCGA 68219 Query 349194 GGATGCCTACCATCTCGCCGGG 349215 || ||| ||||||||||| || Sbjct 68218 GGGCGCCGACCATCTCGCCAGG 68197 >seq4945 Length=87360 Score = 122 bits (134), Expect = 4e-22 Identities = 112/142 (79%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 349074 CGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGG 349133 ||| || |||||| || || | ||||| |||||| || ||||||||||||| ||||||| Sbjct 63697 CGTTGATAATCTCTTTAAGCCGGGGCACGCCCAGCGTGACGTTCTTGGCCGACACGCCGG 63638 Query 349134 CAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGA 349193 || ||||||| || | ||| |||| ||||||| |||||||||| |||| | |||| Sbjct 63637 CATAGTGGAAAGTGTTGAGCGTCATCTGCGTGGCCGGCTCGCCGAGAGACTGCGCAGCGA 63578 Query 349194 GGATGCCTACCATCTCGCCGGG 349215 || ||| ||||||||||| || Sbjct 63577 GGGCGCCGACCATCTCGCCAGG 63556 >seq16107 Length=8295 Score = 96.9 bits (106), Expect = 1e-14 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 21722 TTCCAGGATGAGTTGGGCGATGCGATCGCCAT-GCTTGATTTCAAAGTCCTGGTCAGAGT 21780 |||||| | || || |||| ||||| ||| |||| ||| || ||||| | | | || Sbjct 1849 TTCCAGCACTAGCTGAGCGACTCGATCCCCAACGCTTACTTTGAA-GTCCTCGGCGGCGT 1907 Query 21781 GGTTGAAGAGCACCACCCCGACCTTGCCCCTATAAGAACTGTCGACGACCCCGGCGCCGA 21840 | ||||| ||||| || ||||| ||||||| ||| |||||| ||||||||||| | Sbjct 1908 GATTGAACAGCACAACGCCGACGTTGCCCCGATAGTCCGGGTCGACAACCCCGGCGCCAA 1967 Query 21841 CGTCGAGCCCGTTCTTCAAGGCCAGACCCGATCTGGGAGCGACGCGGCCGTAGTGGCCCT 21900 |||||| || ||| |||||| || || | ||| || || ||||||||| ||| Sbjct 1968 CGTCGATGAAGTGCTTGGCGGCCAGGCCTGACCGGGGCGCCACCCGGCCGTAGCAGCCGG 2027 Query 21901 TTGGGATGGCCA 21912 || ||||||| Sbjct 2028 GCGGAATGGCCA 2039 >seq13265 Length=29743 Score = 91.5 bits (100), Expect = 6e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 448988 TCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCG 449047 || |||| |||| || |||||||| || ||| | | ||||| || | ||||||||| Sbjct 18269 TCCAGCATCATGCCGACAGTCATGCGGGAGGGGAACCCGTGCGGATTGAAGATGATGTCT 18210 Query 449048 GGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACG 449107 ||| ||| | || |||| ||||||||||||| | | || ||| | |||||| Sbjct 18209 GGCACGATGCCAGTCGGAGTGAACGGCATGTCCTCGGCGGGCAGCAGCAGACTGTTGACA 18150 Query 449108 CCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCCCTGCTCGGGCTTGCG 449157 || ||||||||||| || || ||||||||| || |||||| |||| Sbjct 18149 CCTTTCTGGCCGTGCCGAGAGCTGAACTTGTCGCCGATGTCGGGCCTGCG 18100 >seq5441 Length=78822 Score = 91.5 bits (100), Expect = 6e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 448988 TCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCG 449047 || |||| |||| || |||||||| || ||| | | ||||| || | ||||||||| Sbjct 78355 TCCAGCATCATGCCGACAGTCATGCGGGAGGGGAACCCGTGCGGATTGAAGATGATGTCT 78414 Query 449048 GGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACG 449107 ||| ||| | || |||| ||||||||||||| | | || ||| | |||||| Sbjct 78415 GGCACAATGCCAGTCGGAGTGAACGGCATGTCCTCGGCGGGCAGCAGCAGACTGTTGACA 78474 Query 449108 CCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCCCTGCTCGGGCTTGCG 449157 || ||||||||||| || || ||||||||| || |||||| |||| Sbjct 78475 CCTTTCTGGCCGTGCCGAGAGCTGAACTTGTCGCCAATGTCGGGCCTGCG 78524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2083393691078852