Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesocestoides_20corti_20[genbank_20GCA_5F000951315.1_202014-09-26] 7,068 sequences; 117,181,740 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1488 91.5 3e-16 seq310 87.8 3e-15 >seq1488 Length=19430 Score = 91.5 bits (100), Expect = 3e-16 Identities = 87/110 (79%), Gaps = 1/110 (1%) Strand=Plus/Plus Query 137 ATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCA 196 |||||||||||||| | |||||||||| | | | |||||| | |||||||| | ||| Sbjct 8261 ATAGGAAGAGCCGAAAATGAAGGATCAAGGA-CGATGTCGCTGCGGACGCTTGGTTACCA 8319 Query 197 CAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATT 246 |||||||||| || | ||||||| ||| || ||||| | || ||||||| Sbjct 8320 CAAGCCAGTTGTCTCCTTGGTAACCTTTGTGACACCTGTTGCTTCAAATT 8369 >seq310 Length=87926 Score = 87.8 bits (96), Expect = 3e-15 Identities = 85/108 (79%), Gaps = 1/108 (1%) Strand=Plus/Minus Query 137 ATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCA 196 |||||||||||||| | ||||||||||| || |||||||| | |||| ||||| |||| Sbjct 86768 ATAGGAAGAGCCGAAAATGAAGGATCAAAG-GCGACGTCGCTGTTAACGATTGGCCGCCA 86710 Query 197 CAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA 244 |||||||| | | ||| || ||| ||| | ||||| | || ||||| Sbjct 86709 CAAGCCAGCTGTTTCTGGGGCAACATTTGTAACACCTGTTGCTTCAAA 86662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854339611008