Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesocestoides_20corti_20[genbank_20GCA_5F000951315.1_202014-09-26] 7,068 sequences; 117,181,740 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq5817 192 1e-46 >seq5817 Length=716 Score = 192 bits (212), Expect = 1e-46 Identities = 202/260 (78%), Gaps = 7/260 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||||||| | ||| |||||| ||| | ||| ||||||||||||||||| Sbjct 161 CTTCTTAGAGGGACAAGCGGGAGAAGCCGCACGAAATA-GAG-CAATAACAGGTCTGTGA 218 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 ||||||||||||| | ||||||||||||||||||| |||| | | ||||||| ||| || Sbjct 219 TGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACAATGACGGTGGCAACGAG-TCA-GAC 276 Query 192 CTT---GGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 ||| | ||| |||| ||| || || || || | | ||| || ||||| | | | Sbjct 277 CTTCTGGCCCGAAAGGGTTGGACAAACTGGTCAATCACCGTCATGACAGGGATCGGGGCT 336 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 || |||| || | | | |||||||||| ||||||||| || ||||| ||| ||| ||| Sbjct 337 TGGAATTGTTCCCCGTGAACGAGGAATTCCTAGTAAGTGCAAGTCATAAGCTTGCGCTGA 396 Query 309 TTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||| Sbjct 397 TTACGTCCCTGCCCTTTGTA 416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947133051904