Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq230458 190 4e-46 seq167398 116 7e-24 >seq230458 Length=786 Score = 190 bits (210), Expect = 4e-46 Identities = 212/277 (77%), Gaps = 6/277 (2%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| |||| |||| |||||| ||| | | | |||||||||||||||||||||||| Sbjct 333 ATGCTCTTGACTGAGTGTCCCGGGG-GCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 391 Query 98 TCAAAGCAGGCCT--TTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGT 155 || ||||||||| | || | |||| | ||| |||||||| ||||||||| | |||| Sbjct 392 TCCAAGCAGGCCGCGTCGCCTGGATACTTCAGCTAGGAATAATGGAATAGGAC-TCCGGT 450 Query 156 TCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAG 215 |||||||||||||||| | || | | |||||||| ||||| | |||||| | | Sbjct 451 TCTATTTTGTTGGTTTTCGGAACTGGGGCCATGATTAAGAGGGACGGCCGGGGGCATTCG 510 Query 216 TATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGT 275 |||| | |||||||||||||||||| ||||| ||| | |||||||| | Sbjct 511 TATTGTGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGAACCAAAGCGAAAGCAT 570 Query 276 TCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 | ||||| |||||||||||||||| |||||||||| Sbjct 571 TTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 606 >seq167398 Length=1166 Score = 116 bits (128), Expect = 7e-24 Identities = 179/249 (72%), Gaps = 6/249 (2%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT--TGCTCGAATACAT-TAGCAT 130 ||||||||||| ||||| ||||| |||||||||||| ||| ||| | | |||| Sbjct 1165 TTTACTTTGAACAAATTTGAGTGCTCAAAGCAGGCCCACATGCCTGAAATTTTCTTGCAT 1106 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 |||||||| |||||||| | |||||||||||||||||||| | ||| |||||| Sbjct 1105 GGAATAATGCAATAGGACTT-CGGTTCTATTTTGTTGGTTTTCGGTTCCGAAGTAATGGC 1047 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| || || || || ||| | |||| ||| ||||||||||||| ||||| Sbjct 1046 TAAGAGAGACAGACGTGGGCATTTGTATGGCGGTGTTAGAGGTGAAATTCATGGATCGCC 987 Query 251 TGAAGACTAACTACTGCGAAAGC-GTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 |||| || |||||||| || ||| | ||||||||||| | || || |||| Sbjct 986 GCCAGACAGCCTGAAGCGAAAGCATTTTGCCAGGAATGTTTTCATTGA-CAAAGAGCGAA 928 Query 310 AGTTAGGGG 318 ||| || || Sbjct 927 AGTCAGAGG 919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 912304325504