Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq230458 190 4e-46
seq167398 116 7e-24
>seq230458
Length=786
Score = 190 bits (210), Expect = 4e-46
Identities = 212/277 (77%), Gaps = 6/277 (2%)
Strand=Plus/Plus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| |||| |||| |||||| ||| | | | ||||||||||||||||||||||||
Sbjct 333 ATGCTCTTGACTGAGTGTCCCGGGG-GCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 391
Query 98 TCAAAGCAGGCCT--TTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGT 155
|| ||||||||| | || | |||| | ||| |||||||| ||||||||| | ||||
Sbjct 392 TCCAAGCAGGCCGCGTCGCCTGGATACTTCAGCTAGGAATAATGGAATAGGAC-TCCGGT 450
Query 156 TCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAG 215
|||||||||||||||| | || | | |||||||| ||||| | |||||| | |
Sbjct 451 TCTATTTTGTTGGTTTTCGGAACTGGGGCCATGATTAAGAGGGACGGCCGGGGGCATTCG 510
Query 216 TATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGT 275
|||| | |||||||||||||||||| ||||| ||| | |||||||| |
Sbjct 511 TATTGTGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGAACCAAAGCGAAAGCAT 570
Query 276 TCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
| ||||| |||||||||||||||| ||||||||||
Sbjct 571 TTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 606
>seq167398
Length=1166
Score = 116 bits (128), Expect = 7e-24
Identities = 179/249 (72%), Gaps = 6/249 (2%)
Strand=Plus/Minus
Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT--TGCTCGAATACAT-TAGCAT 130
||||||||||| ||||| ||||| |||||||||||| ||| ||| | | ||||
Sbjct 1165 TTTACTTTGAACAAATTTGAGTGCTCAAAGCAGGCCCACATGCCTGAAATTTTCTTGCAT 1106
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|||||||| |||||||| | |||||||||||||||||||| | ||| ||||||
Sbjct 1105 GGAATAATGCAATAGGACTT-CGGTTCTATTTTGTTGGTTTTCGGTTCCGAAGTAATGGC 1047
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| || || || || ||| | |||| ||| ||||||||||||| |||||
Sbjct 1046 TAAGAGAGACAGACGTGGGCATTTGTATGGCGGTGTTAGAGGTGAAATTCATGGATCGCC 987
Query 251 TGAAGACTAACTACTGCGAAAGC-GTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309
|||| || |||||||| || ||| | ||||||||||| | || || ||||
Sbjct 986 GCCAGACAGCCTGAAGCGAAAGCATTTTGCCAGGAATGTTTTCATTGA-CAAAGAGCGAA 928
Query 310 AGTTAGGGG 318
||| || ||
Sbjct 927 AGTCAGAGG 919
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 912304325504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |