Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq280489 145 3e-32
seq53759 145 3e-32
seq149743 131 7e-28
seq92807 111 7e-22
>seq280489
Length=611
Score = 145 bits (160), Expect = 3e-32
Identities = 101/115 (88%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct 125 GGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGA 184
Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 185 GGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 239
>seq53759
Length=3188
Score = 145 bits (160), Expect = 3e-32
Identities = 113/135 (84%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||| |||||| || ||||| |||||||||||||||||||||||| || ||| |||||
Sbjct 888 GAGCAAGAGCGTACATGTTGAGACCCGAAAGATGGTGAACTATGCTTGCGCAGGTTGAAG 829
Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
|| ||||||||||||||||||| || |||| ||||| |||||||||||||||| |
Sbjct 828 CCGGAGGAAACTCTGGTGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGTATGACG 769
Query 669 TGGGTATAGGGGCGA 683
|| ||||||||||||
Sbjct 768 TGAGTATAGGGGCGA 754
>seq149743
Length=1327
Score = 131 bits (144), Expect = 7e-28
Identities = 125/160 (78%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||||||| ||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 820 GAGTCGGGTTGTTTGTGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 761
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 760 ACCGGCACGAGACCGATAGCGGACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 701
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||||| || || ||||||| ||| | ||| || ||
Sbjct 700 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 661
>seq92807
Length=2138
Score = 111 bits (122), Expect = 7e-22
Identities = 110/141 (78%), Gaps = 1/141 (1%)
Strand=Plus/Minus
Query 42 GTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATAT 101
|||| |||||||| ||||||||| | || |||| |||| | | | || || ||||||||
Sbjct 638 GTCGGGTTGTTTGTGAATGCAGCCCAAACTGGGTGGTAGAGTCCATCCAAGGCTAAATAC 579
Query 102 TGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAG 161
||| ||| ||||| ||| |||||| |||| ||||| ||||||||||| || | ||
Sbjct 578 AGGCACGAGTCCGATGGCGATCAAGTACCGTGAGGGAAAGTTGAAAAGCACTCTGAAGAG 519
Query 162 AGAGTTAAAAAGCACGTGAAA 182
|||| |||| ||| |||||||
Sbjct 518 AGAG-TAAACAGCGCGTGAAA 499
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2073213262900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |