Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq280489 145 3e-32 seq53759 145 3e-32 seq149743 131 7e-28 seq92807 111 7e-22 >seq280489 Length=611 Score = 145 bits (160), Expect = 3e-32 Identities = 101/115 (88%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct 125 GGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGA 184 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || || |||||| ||| ||||||||||| ||||| | ||||||||||||||| Sbjct 185 GGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 239 >seq53759 Length=3188 Score = 145 bits (160), Expect = 3e-32 Identities = 113/135 (84%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 ||| |||||| || ||||| |||||||||||||||||||||||| || ||| ||||| Sbjct 888 GAGCAAGAGCGTACATGTTGAGACCCGAAAGATGGTGAACTATGCTTGCGCAGGTTGAAG 829 Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668 || ||||||||||||||||||| || |||| ||||| |||||||||||||||| | Sbjct 828 CCGGAGGAAACTCTGGTGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGTATGACG 769 Query 669 TGGGTATAGGGGCGA 683 || |||||||||||| Sbjct 768 TGAGTATAGGGGCGA 754 >seq149743 Length=1327 Score = 131 bits (144), Expect = 7e-28 Identities = 125/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||| ||||||||| | || ||| |||||| | | ||||| ||||||| Sbjct 820 GAGTCGGGTTGTTTGTGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 761 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| ||||||||||||| ||||||| || | ||||| ||||||| |||||| | Sbjct 760 ACCGGCACGAGACCGATAGCGGACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 701 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || ||||||| ||| | ||| || || Sbjct 700 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 661 >seq92807 Length=2138 Score = 111 bits (122), Expect = 7e-22 Identities = 110/141 (78%), Gaps = 1/141 (1%) Strand=Plus/Minus Query 42 GTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATAT 101 |||| |||||||| ||||||||| | || |||| |||| | | | || || |||||||| Sbjct 638 GTCGGGTTGTTTGTGAATGCAGCCCAAACTGGGTGGTAGAGTCCATCCAAGGCTAAATAC 579 Query 102 TGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAG 161 ||| ||| ||||| ||| |||||| |||| ||||| ||||||||||| || | || Sbjct 578 AGGCACGAGTCCGATGGCGATCAAGTACCGTGAGGGAAAGTTGAAAAGCACTCTGAAGAG 519 Query 162 AGAGTTAAAAAGCACGTGAAA 182 |||| |||| ||| ||||||| Sbjct 518 AGAG-TAAACAGCGCGTGAAA 499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2073213262900