Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq59048 219 1e-54
>seq59048
Length=3006
Score = 219 bits (242), Expect = 1e-54
Identities = 199/247 (81%), Gaps = 8/247 (3%)
Strand=Plus/Plus
Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60
|||| |||||| || |||||||||||||||||||||| | |||||||||||||||||||
Sbjct 1819 TACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGGCTCGCACAAGCGGTGGAGCAT 1878
Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120
| |||||||||||| | ||||||| ||||||||||| |||||||| || | |
Sbjct 1879 GCGGTTTAATTCGATGTTACGCGAAAAACCTTACCAACCCTTGACAT--GGTGGTCGCGG 1936
Query 121 TAGAGATAGAGGTTTCCC----CTTCGG-GGGACAGAGTGACAGGTGATGCATGGTTGTC 175
| | ||| | |||| ||||| |||| | ||||||| ||||||| ||||
Sbjct 1937 GAAGCAGAGATGCATCCCTTCAGTTCGGCTGGAC-CACACACAGGTGTTGCATGGCTGTC 1995
Query 176 GTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTA 235
|||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 1996 GTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCATTCTTA 2055
Query 236 GTTGCCA 242
||||||
Sbjct 2056 TTTGCCA 2062
Score = 199 bits (220), Expect = 1e-48
Identities = 172/212 (81%), Gaps = 1/212 (0%)
Strand=Plus/Plus
Query 285 GGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTG 344
||||||||||| |||||| ||||| |||||||| |||||| | ||||||||||| ||||
Sbjct 2247 GGAGGAAGGTGAGGACGATGTCAAGTCATCATGGCCCTTACGGGTTGGGCTACACGCGTG 2306
Query 345 CTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTG 404
||||||||| ||| |||| ||| | || | || || |||||||||| |||| |
Sbjct 2307 CTACAATGGTATTCACAGAGGGAAGCAAGACGGTGACGTGGAGCAAATCCCTAAAAGATA 2366
Query 405 TTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCG 464
| |||||||||||||| |||||||||||| |||||| ||||||||||||||||||
Sbjct 2367 T-CTCAGTTCGGATTGCTCTCTGCAACTCGAGAGCATGAAGTTGGAATCGCTAGTAATCG 2425
Query 465 TAGATCAGCATGCTACGGTGAATACGTTCCCG 496
||||||||||| |||||||||||||| ||
Sbjct 2426 CGGATCAGCATGCCGCGGTGAATACGTTCTCG 2457
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1499241374080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |