Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq59048 219 1e-54 >seq59048 Length=3006 Score = 219 bits (242), Expect = 1e-54 Identities = 199/247 (81%), Gaps = 8/247 (3%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| || |||||||||||||||||||||| | ||||||||||||||||||| Sbjct 1819 TACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGGCTCGCACAAGCGGTGGAGCAT 1878 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 | |||||||||||| | ||||||| ||||||||||| |||||||| || | | Sbjct 1879 GCGGTTTAATTCGATGTTACGCGAAAAACCTTACCAACCCTTGACAT--GGTGGTCGCGG 1936 Query 121 TAGAGATAGAGGTTTCCC----CTTCGG-GGGACAGAGTGACAGGTGATGCATGGTTGTC 175 | | ||| | |||| ||||| |||| | ||||||| ||||||| |||| Sbjct 1937 GAAGCAGAGATGCATCCCTTCAGTTCGGCTGGAC-CACACACAGGTGTTGCATGGCTGTC 1995 Query 176 GTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTA 235 |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 1996 GTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCATTCTTA 2055 Query 236 GTTGCCA 242 |||||| Sbjct 2056 TTTGCCA 2062 Score = 199 bits (220), Expect = 1e-48 Identities = 172/212 (81%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 285 GGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTG 344 ||||||||||| |||||| ||||| |||||||| |||||| | ||||||||||| |||| Sbjct 2247 GGAGGAAGGTGAGGACGATGTCAAGTCATCATGGCCCTTACGGGTTGGGCTACACGCGTG 2306 Query 345 CTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTG 404 ||||||||| ||| |||| ||| | || | || || |||||||||| |||| | Sbjct 2307 CTACAATGGTATTCACAGAGGGAAGCAAGACGGTGACGTGGAGCAAATCCCTAAAAGATA 2366 Query 405 TTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCG 464 | |||||||||||||| |||||||||||| |||||| |||||||||||||||||| Sbjct 2367 T-CTCAGTTCGGATTGCTCTCTGCAACTCGAGAGCATGAAGTTGGAATCGCTAGTAATCG 2425 Query 465 TAGATCAGCATGCTACGGTGAATACGTTCCCG 496 ||||||||||| |||||||||||||| || Sbjct 2426 CGGATCAGCATGCCGCGGTGAATACGTTCTCG 2457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1499241374080