Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq10868 224 2e-56
seq43977 122 1e-25
seq743 104 4e-20
seq256312 84.2 4e-14
>seq10868
Length=6470
Score = 224 bits (248), Expect = 2e-56
Identities = 178/214 (83%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||||||||||||||| || |||||||| || ||| ||||||||||||||||||||||
Sbjct 2889 TCATCAGTAGGGTAAAACCAATCTGTCTCACGATGGTTTAAACCCAGCTCACGTTCCCTA 2830
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
| ||| || |||||| | ||| |||||||| || |||||| || |||||||
Sbjct 2829 TAAGTAAATGGGCAATCCCATCCTTGGTGAATTCTGATTTACAATGATAAGATGAGCCGA 2770
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210
||||||||||| |||||| |||||||||||| ||||| |||||||| |||||||||
Sbjct 2769 TATCGAAGGATCTAAAAGCGACGTCGCTATGAGAATTTGGCCGCCACAAGTCAGTTATCC 2710
Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA 244
||||||||||||||||| ||||||| || |||||
Sbjct 2709 CTGTGGTAACTTTTCTGACACCTCTTGCTTCAAA 2676
>seq43977
Length=3590
Score = 122 bits (134), Expect = 1e-25
Identities = 69/70 (99%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 70 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 11
Query 91 TTAGTGGGTG 100
||||||||||
Sbjct 10 TTAGTGGGTG 1
>seq743
Length=12286
Score = 104 bits (114), Expect = 4e-20
Identities = 59/60 (98%), Gaps = 0/60 (0%)
Strand=Plus/Plus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 7303 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 7362
>seq256312
Length=691
Score = 84.2 bits (92), Expect = 4e-14
Identities = 128/181 (71%), Gaps = 6/181 (3%)
Strand=Plus/Minus
Query 47 ACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAT 106
|| || |||||||| |||| |||||||||||||||||| || ||| | || |||||
Sbjct 463 ACCAAACTGTCTCACGACGTTCTAAACCCAGCTCACGTACCACTTTAATCGGCGAACAGC 404
Query 107 CCAACGCTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCA 163
| ||| ||| ||| |||| | | | ||| || ||||||||||||| | ||
Sbjct 403 CGAACCCTTGGGACC---TTCTCCAGCCCCAGGATGTGATGAGCCGACATCGAGGTGCCA 347
Query 164 AAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTT 223
|| |||||||||| |||||||| || |||| |||||||| | ||| ||||
Sbjct 346 AACGATTTCGTCGCTATGGACGCTTGGAAATCATCAGCCTGTTATCCCCGGAGTACCTTT 287
Query 224 T 224
|
Sbjct 286 T 286
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 851696695488
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |