Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq59048 262 8e-68 >seq59048 Length=3006 Score = 262 bits (290), Expect = 8e-68 Identities = 260/335 (78%), Gaps = 16/335 (5%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| || ||| ||||| | ||| ||| ||| |||| ||||||||||||||||||| Sbjct 1382 CTTTACAACCCTAAGGCCTTCGT-CACCCACTCGGTATTG-CTGGATCAGGCTTTCGCCC 1325 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 1324 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 1265 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||||||||||||||||||||| ||| |||||| | |||||| ||||||||| | Sbjct 1264 TGTGGCTGATCATCCTCTCAGACCAGCTACAGATCGTTGGCTTGGTAGGCCATTACCCTA 1205 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 ||||||| |||||| ||| |||||||| |||| | || ||| Sbjct 1204 CCAACTACCTAATCTGACGCGGGCTCATCCATCAGCGATA------AA--------TCTT 1159 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAG 300 || ||| || ||| |||||||||| | |||| || ||||| || ||| | Sbjct 1158 TCCTCCGAAGAGAATATACGGTATTAGCATTTATTTCTAAATGTTATTCCGTACTGATGG 1099 Query 301 GCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 | ||||||| | | ||||||||||||| ||| || Sbjct 1098 GTAGATTCCCACGTGTTACTCACCCGTCTGCCACT 1064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068608213440