Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq59048 120 3e-25 >seq59048 Length=3006 Score = 120 bits (132), Expect = 3e-25 Identities = 118/151 (78%), Gaps = 1/151 (1%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||| ||||||| ||| |||| |||| |||||| ||||| | || | Sbjct 2396 TCGAGTTGCAGAGAGCAATCCGAACTGAGATAT-CTTTTAGGGATTTGCTCCACGTCACC 2338 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | | || |||||||| |||||||||| ||| ||| ||||| |||| ||||||||| Sbjct 2337 GTCTTGCTTCCCTCTGTGAATACCATTGTAGCACGCGTGTAGCCCAACCCGTAAGGGCCA 2278 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCC 151 ||| |||||||| || ||| ||||||||||| Sbjct 2277 TGATGACTTGACATCGTCCTCACCTTCCTCC 2247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414724916060