Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq59048 105 1e-20 >seq59048 Length=3006 Score = 105 bits (116), Expect = 1e-20 Identities = 99/125 (79%), Gaps = 1/125 (1%) Strand=Plus/Minus Query 167 TTTCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAAC 226 |||||| || |||| | |||||||| | | |||||| |||| ||| |||| | ||| Sbjct 1535 TTTCACTTCCAACTTACTAAACCGCCTACGCACTCTTTACGCCCAGTAATTCCGAACAAC 1476 Query 227 GCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGC-TTATTCCTC 285 ||| ||| ||| ||| |||||||||||||||||||| ||||||||| ||| || || || Sbjct 1475 GCTAGCCCCCTCCGTCTTACCGCGGCTGCTGGCACGGAGTTAGCCGGGGCTTTCTTGGTC 1416 Query 286 AGGTA 290 ||||| Sbjct 1415 AGGTA 1411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 826259640458