Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq230458 104 2e-20 seq167398 77.0 3e-12 >seq230458 Length=786 Score = 104 bits (114), Expect = 2e-20 Identities = 130/175 (74%), Gaps = 4/175 (2%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC--CTTTGCTCGAATACATTACCATG 70 ||||||||||||||||||||| |||| |||||||| | | || | |||| | | | | Sbjct 368 TTTACTTTGAAAAAATTAGAGTGTTCCAAGCAGGCCGCGTCGCCTGGATACTTCAGCTAG 427 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130 ||||||| ||||||||| | |||||||||||||| ||||| | ||| | | ||||| Sbjct 428 GAATAATGGAATAGGAC-TCCGGTTCTATTTTGTTGGTTT-TCGGAACTGGGGCCATGAT 485 Query 131 AAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 486 TAAGAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 540 >seq167398 Length=1166 Score = 77.0 bits (84), Expect = 3e-12 Identities = 125/177 (71%), Gaps = 5/177 (3%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---CTTTGCTCGAATACATTACCAT 69 ||||||||||| ||||| ||| | ||||||||||| | | || ||| | ||| Sbjct 1165 TTTACTTTGAACAAATTTGAGTGCTCAAAGCAGGCCCACATGCCTGAAATTTTCTTGCAT 1106 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 |||||||| |||||||| | |||||||||||||| ||||| | || | |||||| Sbjct 1105 GGAATAATGCAATAGGAC-TTCGGTTCTATTTTGTTGGTTT-TCGGTTCCGAAGTAATGG 1048 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 || | || || || ||| | |||| ||| | ||||||||||| ||||| Sbjct 1047 CTAAGAGAGACAGACGTGGGCATTTGTATGGCGGTGTTAGAGGTGAAATTCATGGAT 991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510430665920