Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq230458 104 2e-20
seq167398 77.0 3e-12
>seq230458
Length=786
Score = 104 bits (114), Expect = 2e-20
Identities = 130/175 (74%), Gaps = 4/175 (2%)
Strand=Plus/Plus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC--CTTTGCTCGAATACATTACCATG 70
||||||||||||||||||||| |||| |||||||| | | || | |||| | | | |
Sbjct 368 TTTACTTTGAAAAAATTAGAGTGTTCCAAGCAGGCCGCGTCGCCTGGATACTTCAGCTAG 427
Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130
||||||| ||||||||| | |||||||||||||| ||||| | ||| | | |||||
Sbjct 428 GAATAATGGAATAGGAC-TCCGGTTCTATTTTGTTGGTTT-TCGGAACTGGGGCCATGAT 485
Query 131 AAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
|| | ||| | |||||| | ||||| | | ||||||||||||||||
Sbjct 486 TAAGAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 540
>seq167398
Length=1166
Score = 77.0 bits (84), Expect = 3e-12
Identities = 125/177 (71%), Gaps = 5/177 (3%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---CTTTGCTCGAATACATTACCAT 69
||||||||||| ||||| ||| | ||||||||||| | | || ||| | |||
Sbjct 1165 TTTACTTTGAACAAATTTGAGTGCTCAAAGCAGGCCCACATGCCTGAAATTTTCTTGCAT 1106
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|||||||| |||||||| | |||||||||||||| ||||| | || | ||||||
Sbjct 1105 GGAATAATGCAATAGGAC-TTCGGTTCTATTTTGTTGGTTT-TCGGTTCCGAAGTAATGG 1048
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186
|| | || || || ||| | |||| ||| | ||||||||||| |||||
Sbjct 1047 CTAAGAGAGACAGACGTGGGCATTTGTATGGCGGTGTTAGAGGTGAAATTCATGGAT 991
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 510430665920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |