Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= AAMG01002175.1
Length=414
Score E
Sequences producing significant alignments: (Bits) Value
seq59048 257 4e-66
>seq59048
Length=3006
Score = 257 bits (284), Expect = 4e-66
Identities = 307/415 (74%), Gaps = 24/415 (6%)
Strand=Plus/Minus
Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63
||||||||||| ||||||||| ||| ||| ||| || |||| ||||||||| |||||||
Sbjct 1382 CTTTACAACCCTAAGGCCTTCGTCACCCACTCGGTATTGCTGGATCAGGCTTTCGCCCAT 1323
Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123
||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct 1322 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTG 1263
Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183
|||||| |||||||||||||||||||| |||||| | || ||| ||||||||||| ||
Sbjct 1262 TGGCTGATCATCCTCTCAGACCAGCTACAGATCGTTGGCTTGGTAGGCCATTACCCTACC 1203
Query 184 AACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTG 243
||||| |||||| | ||| |||||| || || | || |||||
Sbjct 1202 AACTACCTAATCTGACGCGGGCTCATCCATCAGCGATA------AA--------TCTTTC 1157
Query 244 GTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGC 303
|| || ||| |||||||||| |||| | ||||| || | ||
Sbjct 1156 CTCCGAAGAGAATATACGGTATTAGCATTTATTTCTAAATGTTATTCCGTACTGATGGGT 1097
Query 304 AGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCT 363
|| |||||| ||||||||||||| |||||| | || ||||||| |||
Sbjct 1096 AGATTCCCACGTGTTACTCACCCGTCTGCCACTAACTAATTTAG-AGCAAGC-----CCT 1043
Query 364 --GTTA--CCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414
||| ||||||||||||||||||||| || | ||| ||||||| ||||||
Sbjct 1042 AAATTAGCCCGTTCGACTTGCATGTGTTAAGCATACCGAAAGCGTTCGTTCTGAG 988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1218532350848
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |